PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g620660.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 193aa MW: 22046.3 Da PI: 10.2797 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.1 | 2e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+++fs tgkl+e+ s Pd.00g620660.m02 9 KKIDNTTARQVTFSKRRRGLFKKAQELSTLCDAEIALVVFSATGKLFEFTS 59 68***********************************************75 PP | |||||||
2 | K-box | 47.9 | 5.7e-17 | 69 | 150 | 14 | 95 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 + + +a L+kei + +e+R+l+Ge+L++L++keLq+Le+ L ++l+++R+ K e++l++i l+ k+ + q ++ +L+ Pd.00g620660.m02 69 LQLESSTSAALRKEIAENTHELRKLMGEELQELNMKELQELEKLLGSGLRRVRDAKGEIVLKEITSLKWKMANRQVQTLELE 150 5666777899*******9****************************************************999988777665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MTRRKIQIKK IDNTTARQVT FSKRRRGLFK KAQELSTLCD AEIALVVFSA TGKLFEFTSS 60 RLNQPSLELQ LESSTSAALR KEIAENTHEL RKLMGEELQE LNMKELQELE KLLGSGLRRV 120 RDAKGEIVLK EITSLKWKMA NRQVQTLELE RGQSFEPIGD FIHSDPSQDH DSSDTSLKLG 180 LAFPNRIRQM KSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-53 | MIKC_MADS family protein |