PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g619900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 446aa    MW: 51424.9 Da    PI: 6.8415
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g619900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.8e-1118891790
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                      ++pkkf+ ++g ++ +++ l l + s+  W+v l  r+ +g++++ kGW +F +   L+    +vF ++g+s+f
  Pd.00g619900.m01 18 RIPKKFVMKYGDDPSNPVSLELPSGSSSAWKVDL--RRLDGEVWFDKGWADFSEFYSLDRDHWLVFGYKGNSKF 89
                      69***************9999999999*******..*********************************99888 PP
2B346.28.1e-15911631794
                       E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       +lp +f + + +k  +s +++l+ ++ r+W v+l+y  ++gr  + +GW eFv++n+Lk++D++vF+ ++ ++ ++++
  Pd.00g619900.m01  91 WLPSEFHKLYPIK--NSGEVILRVLDRRTWLVNLKY--GGGRAQFLSGWMEFVHDNNLKVNDVCVFESID-NKIKPLF 163
                       6899999888766..4559***************55..555544557********************766.4444555 PP
3B348.81.3e-15283375199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkv +  ++  ++++++p+kf++++g +   s  + l+ +sg +W+++l  r+ +g+ ++ kGW eF +   L+   ++vF+++g+s+f  +
  Pd.00g619900.m01 283 FFKVAMCTSYIHHRNMRIPNKFLTKCGDD--LSNPVFLNVPSGSKWKMEL--RRWDGEAWFDKGWPEFFEFYSLDNCHSLVFRYEGNSKF--N 369
                       667766666677777***********988..6667***************..99999999**************************9999..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v +f++
  Pd.00g619900.m01 370 VCIFDQ 375
                       999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MILSRFDQLL DTISVVQRIP KKFVMKYGDD PSNPVSLELP SGSSSAWKVD LRRLDGEVWF  60
DKGWADFSEF YSLDRDHWLV FGYKGNSKFQ WLPSEFHKLY PIKNSGEVIL RVLDRRTWLV  120
NLKYGGGRAQ FLSGWMEFVH DNNLKVNDVC VFESIDNKIK PLFDVVIFPN IEAANCPNDR  180
EQTVHEIEQT NEDDDPSDDS SDESGDADYL YDDSVEIIEN CTTFPRRTME KSPNAMSSAS  240
QEKQSQFKCN VRLYSSTGKV NFPAGGNAIA LQRANAFKSK HPFFKVAMCT SYIHHRNMRI  300
PNKFLTKCGD DLSNPVFLNV PSGSKWKMEL RRWDGEAWFD KGWPEFFEFY SLDNCHSLVF  360
RYEGNSKFNV CIFDQSFKQI DYALKMPKMK ETNSDDSGDV TEILDESVPR PRKSREKSPL  420
QCLRPHKKAR TSSRGKAETK HLSSTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411417PRKSREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-24B3 family protein