PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g617620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 300aa MW: 33370.4 Da PI: 6.968

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g617620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.6	5.9e-20	31	92	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++ Pd.00g617620.m01 31 STRWTPTSDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 92 58***************8678***********************************97 PP
2	Wus_type_Homeobox	113.5	1.1e-36	30	94	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ Pd.00g617620.m01 30 SSTRWTPTSDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 94 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MEPQQTQQQP NEDGSNKGTS SGTNFLCRQS STRWTPTSDQ IRILKDLYYN NGVRSPSAEQ 60 IQRISARLRQ YGKIEGKNVF YWFQNHKARE RQKKRFIDVP APPIMQRSGL GINNNNAPTA 120 YEPINHSNKY PNSSASAGVS ASSAGVIAVG QMGSYGYGSM TMEKSFRATA GGTSSGHVGG 180 SNNNIGHNFG SWVGVDPYSS PYTLFDKRSS SRQVFGDQEN TMDEEDHEYQ ENLQASPEIE 240 TLPLFPMHGE DIHGFGNIKS TSDGYYSGWY RSDDGNNGRT SLELSLNSYG HMTPDYFRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	5e-47	WOX family protein