PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g613040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 365aa MW: 40770.4 Da PI: 7.1249 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 116.9 | 2e-36 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 lp+G++F+Ptd+el+ e+L++kvegk+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ Pd.00g613040.m01 46 LPAGVKFDPTDQELI-EHLEAKVEGKDtkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtec 133 799************.99*********6665443...133333666646**********.555666799******************733345 PP NAM 80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Pd.00g613040.m01 134 dlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 55544778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG 240 SGSCSSKEII PPHPHSHSHR EHDQMSAVAS GVVAAAPISS YCAMDIHQLK SDHFSFAPFR 300 KSFDEVGIGG EASTAREGPA SGTCEEMRGE HHHQRSESSM PNPQEAEWMK YSSFWPDPDN 360 PDHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-145 | NAC family protein |