PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g611900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 232aa MW: 27435.1 Da PI: 4.8129 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 26 | 2.4e-08 | 122 | 174 | 2 | 53 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkek 53 Wt++ v +L+e+ ++ +l+r++l+ +W ev++k+ ++ ++er+ +qC+++ Pd.00g611900.m01 122 WTEHAVFVLLEVWGDRFLQLGRKSLRSEDWHEVAEKVsEASKIERTDTQCRNS 174 *************************************677899*******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MDDMDDDARY HSKAYSLNHH NSSDRRKINI RNTQYSRPIA NRYAEEDDDE LDEFDEGNGR 60 QDHDEEEEEE LPRGLHRNFD ADDGFERHTK KRKVKNLESN YEFAPRVRVP YRDPSSRGEE 120 DWTEHAVFVL LEVWGDRFLQ LGRKSLRSED WHEVAEKVSE ASKIERTDTQ CRNSGEYVFM 180 NTRVYLERSN GFDEMRDSPG EKLTTMMMKR MFLLRISVND AGLVFILKDG GI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 1e-36 | Trihelix family protein |