PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g608850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 462aa MW: 50737 Da PI: 7.8844

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g608850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	76.5	3.1e-24	187	243	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ + v+ei+Y+++H+he Pd.00g608850.m01 187 SDGYNWRKYGQKQVKSPQGSRSYYRCTYSECYAKK-IECCDHSGYVTEIVYKSQHTHE 243 7******************************98.*******************8 PP
2	WRKY	97.8	7.3e-31	325	381	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+ Pd.00g608850.m01 325 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAIDNTSAVIITYKGIHDHD 381 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MAEHESFDAL QLGELQNSAP ESRETQLETL AVPSTLELSE NDQCAGFQVN STSQSIDGAQ 60 LQEQLGVSHQ EILAIVTHQD SQMQTQSPVQ LAVYPTPLSE LSPTSVTKSI QTQTQSPLQL 120 TVYPTPLSEL SPTSVTQSIS SAPSPILLEQ KLPPEKVNTL CTPEVDKQNS SDHKFISSVP 180 LVKTSASDGY NWRKYGQKQV KSPQGSRSYY RCTYSECYAK KIECCDHSGY VTEIVYKSQH 240 THEPPRKSNC TKESKLALSA ECVRNSVTEH PCRTVNDSEV STSSKEQPKR RVKKSNLEYS 300 TSLLKPGKKP KFVVHAAGDV GISGDGYRWR KYGQKMVKGN PHPRNYYRCT SAGCPVRKHI 360 ETAIDNTSAV IITYKGIHDH DMPVPKKRHG PPSAPLVAAA APASMNNLHI KKTDTHQNQI 420 SSTQWSVDTG GELTGEALDL GGEKAMESAR TLLSIGFEIK PC

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MAEHESFDAL QLGELQNSAP ESRETQLETL AVPSTLELSE NDQCAGFQVN STSQSIDGAQ  60
LQEQLGVSHQ EILAIVTHQD SQMQTQSPVQ LAVYPTPLSE LSPTSVTKSI QTQTQSPLQL  120
TVYPTPLSEL SPTSVTQSIS SAPSPILLEQ KLPPEKVNTL CTPEVDKQNS SDHKFISSVP  180
LVKTSASDGY NWRKYGQKQV KSPQGSRSYY RCTYSECYAK KIECCDHSGY VTEIVYKSQH  240
THEPPRKSNC TKESKLALSA ECVRNSVTEH PCRTVNDSEV STSSKEQPKR RVKKSNLEYS  300
TSLLKPGKKP KFVVHAAGDV GISGDGYRWR KYGQKMVKGN PHPRNYYRCT SAGCPVRKHI  360
ETAIDNTSAV IITYKGIHDH DMPVPKKRHG PPSAPLVAAA APASMNNLHI KKTDTHQNQI  420
SSTQWSVDTG GELTGEALDL GGEKAMESAR TLLSIGFEIK PC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-118	WRKY family protein