PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g605370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 303aa MW: 34206.3 Da PI: 7.8407 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 68.4 | 1.4e-21 | 38 | 132 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 rWt++e+ +Lie+++ +e+++++g+ +p+W+ vs+++++rg++r+p+qC+++w+nl ++kki+++e++ + ++s +++ + Pd.00g605370.m01 38 RWTRHETFVLIEGKKVVENAVQKGRsrsssalgsdHFEPKWDLVSSYCKQRGVSREPVQCRKRWSNLLVDFKKIRNWESQIKGAAESFWVMRN 130 8*********************986666777777688*******************************************9888888888877 PP trihelix 84 ql 85 ++ Pd.00g605370.m01 131 DV 132 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MALDSIKHEG ASSTTPDQVD RQQVPNGSSD DRAKRHPRWT RHETFVLIEG KKVVENAVQK 60 GRSRSSSALG SDHFEPKWDL VSSYCKQRGV SREPVQCRKR WSNLLVDFKK IRNWESQIKG 120 AAESFWVMRN DVRKEKKLPG FFDREVYNIL DGNAVTATAA CPLALLIPVQ TDAQSDSEES 180 EQEETESKKE NLMQDSPATT VTTPMPSSGT IKEKRGLDSN TCGEHISQEK RKQRRLAIDG 240 CEDNYSDQLI SVLERNNALL NAQLEARNIN CHLDREQRKE QSNSLLAAIS KVTDALVRIA 300 DKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 236 | EKRKQRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-80 | Trihelix family protein |