PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g604370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 876aa MW: 97024.2 Da PI: 8.5644

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g604370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.7	4.9e-21	784	864	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev +Li++r ++ +r++ k +++lWee+s+++ + g++rsp qCk+ w +l ++y++ k+g++++ +++pyf++++ Pd.00g604370.m01 784 KWKPEEVEKLIKMRGKLRSRFQVVKGRMALWEEISRNLLADGINRSPGQCKSLWASLVQKYEESKNGKRSQ-----KSWPYFEEMD 864 7***************************************************************99983.....56*****7 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
MAAFGALSPC PYSLLWRPKP TNRCVSCSVG SSAVTGTRGS NVKRSGRMEG PRKSMEDSVQ 60 RKMEQFYEGR EGPPIRVLPI GGLGEIGMNC MLVGNYDRYI LIDAGVMFPD FDELGVQKII 120 PDTTFIKKWS HKIEAIVITH GHEDHIGALP WVIPALDPRT PIFASSFTME LIKKRLKEHG 180 IFVPSRLKTF RTKRKFMAGP FEIEPVRVTH SIPDCCGLVL RCSDGTILHT GDWKIDESPL 240 DGRGFDREAL EELSKEGVTL MMSDSTNVLS PGRTTSETSV ADALLRHISA AKGRVITTQF 300 ASNIHRLGSV KAAADFTGRK LVFVGMSLRT YLDAAWKDGK APIDPSSLVK VEDIDSYAPK 360 DLLIVTTGSQ AEPRAALNLA SFGSSHSVKL TKEDIILYSA KVIPGNESRV MKMLNRISEI 420 GSTIVMGKNE GLHTSGHGYR GELEEVLQIV KPQHFLPIHG ELLFLKEHEL LGRSTGIRHT 480 TVIKNGEMLG VSHLRNRRVL SNGFTLLGKE NLQLKFSDGD KAFGTSSELC VDERLRVALD 540 GIIVVSMEIL RPQNVNGLTE NSIKGKIKIT TRCLWLDKGK LIDALHKAAH AALSSCPINC 600 PLPHMERTVS EVLRKLVRKY SGKRPDVIAI AMENPAAVLA DEVSVRLSGK SHVGSEMSTL 660 RKVIDRHPYK SQSTRTQADE GKDNACLQST SQQDTEDSVL EDDGIEVEVL LPEEDSATSN 720 SKSEKLSSDS EKSDDFWNAI VRLSTVDKSV EDKNGLAVQQ EHLKKDGPDN SEIPNPSKPV 780 KRNKWKPEEV EKLIKMRGKL RSRFQVVKGR MALWEEISRN LLADGINRSP GQCKSLWASL 840 VQKYEESKNG KRSQKSWPYF EEMDGALSDS EEMATK

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

MAAFGALSPC PYSLLWRPKP TNRCVSCSVG SSAVTGTRGS NVKRSGRMEG PRKSMEDSVQ  60
RKMEQFYEGR EGPPIRVLPI GGLGEIGMNC MLVGNYDRYI LIDAGVMFPD FDELGVQKII  120
PDTTFIKKWS HKIEAIVITH GHEDHIGALP WVIPALDPRT PIFASSFTME LIKKRLKEHG  180
IFVPSRLKTF RTKRKFMAGP FEIEPVRVTH SIPDCCGLVL RCSDGTILHT GDWKIDESPL  240
DGRGFDREAL EELSKEGVTL MMSDSTNVLS PGRTTSETSV ADALLRHISA AKGRVITTQF  300
ASNIHRLGSV KAAADFTGRK LVFVGMSLRT YLDAAWKDGK APIDPSSLVK VEDIDSYAPK  360
DLLIVTTGSQ AEPRAALNLA SFGSSHSVKL TKEDIILYSA KVIPGNESRV MKMLNRISEI  420
GSTIVMGKNE GLHTSGHGYR GELEEVLQIV KPQHFLPIHG ELLFLKEHEL LGRSTGIRHT  480
TVIKNGEMLG VSHLRNRRVL SNGFTLLGKE NLQLKFSDGD KAFGTSSELC VDERLRVALD  540
GIIVVSMEIL RPQNVNGLTE NSIKGKIKIT TRCLWLDKGK LIDALHKAAH AALSSCPINC  600
PLPHMERTVS EVLRKLVRKY SGKRPDVIAI AMENPAAVLA DEVSVRLSGK SHVGSEMSTL  660
RKVIDRHPYK SQSTRTQADE GKDNACLQST SQQDTEDSVL EDDGIEVEVL LPEEDSATSN  720
SKSEKLSSDS EKSDDFWNAI VRLSTVDKSV EDKNGLAVQQ EHLKKDGPDN SEIPNPSKPV  780
KRNKWKPEEV EKLIKMRGKL RSRFQVVKGR MALWEEISRN LLADGINRSP GQCKSLWASL  840
VQKYEESKNG KRSQKSWPYF EEMDGALSDS EEMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein