PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g602420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 457aa MW: 52097.8 Da PI: 6.5647 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 187 | 233 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+q+G + W+ Ia++++ gR +kqc++rw+++l Pd.00g602420.m01 187 KGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLP-GRIGKQCRERWHNHL 233 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 58.3 | 1.7e-18 | 239 | 281 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ Pd.00g602420.m01 239 KDTWSEEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 281 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 457 aa Download sequence |
MMKLYNMKDE FPFEASSSSS KGNYNYLQDF HHLDHQFQVN GSSSNPMFGV QNPCFDPYND 60 TTYTYEASTT DVKFYECKPH NAETNMGHGQ VLDNFQSGSG YLNFPTHTSN PLDHLMGSSH 120 RSATNFLPLD YQDIKPMNFV VPDEVSCINN TDQNGYYKKF GMNGKSRVSA LTRGSTYKGR 180 KKSNVVKGQW TIEEDRLLIQ LVEQYGVRKW SHIAQMLPGR IGKQCRERWH NHLRPDIKKD 240 TWSEEEDKIL IQAHAEIGNK WAEIAKRLPG RTENSIKNHW NATKRRQYSK RKCRSKYPRG 300 SLLQEYIKSL NLDSTGSSTG RQRKNKSGNN NATSPNNMAS SSTKSHTQQT QNNVGFSYAN 360 DRLVPNHDFN EDPDFCFDDN MFQEGCSIDS LLDDIPCALV LGENNGDFDG KIMAQASVVA 420 DEEKDFEMEM QVDVGPVMES SEVKKELDLV EMISQVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-109 | MYB family protein |