PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g600120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 338aa MW: 36442 Da PI: 6.95

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g600120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.7	4.2e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ ++ fC+ ++ lC++C H+ H+ Pd.00g600120.m01 4 QCDVCNKDDASVFCTADEAALCDTCDHRVHHAnklaskHQ 43 7****99****************9964446666666 PP
2	zf-B_box	25	4e-08	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + ++C+ ++e ++ lfC++++ lC++C l H Ht Pd.00g600120.m01 54 QLPVCDICQERRAFLFCQQDRAILCRECDLPVHAAneHT 92 7899**************************999556665 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MKIQCDVCNK DDASVFCTAD EAALCDTCDH RVHHANKLAS KHQRFSLIHP SSKQLPVCDI 60 CQERRAFLFC QQDRAILCRE CDLPVHAANE HTQKHSRFLL TGVKLSATST LYTSSSPPTA 120 TTSLKSTDAT VTDPKPQPLI KKSVSTSSPA ISNPPSMSKN STLTTNTANS NKGGGIFVAH 180 DGVGCGSTSS ISEYLIETLP GWHVEDFLDF SSGPLGFCKA DNETVLPFMD ADLESNLSSF 240 SSEHMGIWVP QASNPMHQYS QMGGELIGFN KDGTNLKANN RTWRDDSFTV PQISPPSVGA 300 KSHLKPSTTQ LGWGVCTSAG SVPSSLALVL CCRMQTSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-80	DBB family protein