PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g600070.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | SRS | ||||||||
Protein Properties | Length: 206aa MW: 21770 Da PI: 7.7952 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 108.4 | 1.1e-33 | 14 | 68 | 3 | 57 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqla 57 s +++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerq+q + Pd.00g600070.m01 14 SSGMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQEQFS 68 5689***********************************************9865 PP | |||||||
2 | DUF702 | 89.9 | 5.8e-28 | 70 | 123 | 100 | 153 |
DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 le +++P+evss+avfrcvrvs++dd+++++aYqtav+igGhvfkG+LydqG++ Pd.00g600070.m01 70 LELAQFPSEVSSPAVFRCVRVSAMDDADDQYAYQTAVNIGGHVFKGLLYDQGPD 123 67789***********************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 206 aa Download sequence |
MRQGGGGGLG GSSSSGMNCQ DCGNQAKKDC PHMRCRTCCK SRGFQCQTHV KSTWVPAAKR 60 RERQEQFSGL ELAQFPSEVS SPAVFRCVRV SAMDDADDQY AYQTAVNIGG HVFKGLLYDQ 120 GPDGQYYPSS STGGGGESSS GGRHDHQEGG GAHPHHQQHN LVTVAATAGT TSHGGNPSTT 180 LLDPSLFPTP LNAFMAGTQI FPPPRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75520.1 | 2e-56 | SRS family protein |