PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g598580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 264aa MW: 30014.4 Da PI: 8.5812 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.7 | 7.5e-17 | 20 | 104 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 d ++++ l++p f+++++g + t++ ++g+ W v+l ++++++ ++ kGW +Fvk++ +++ Df++F +dg sef v++++k Pd.00g598580.m01 20 DDDFSQH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCWAVEL--EQRRDGLFFHKGWPGFVKDHFIESEDFLIFDYDGGSEF--DVTIYDK 104 4666666.********8887774..348***************..*********************************98998..8888876 PP | |||||||
2 | B3 | 34.3 | 4.3e-11 | 141 | 236 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+++p d + l +pk+ a + +g+ + t++l+d++grsW v+l + ++gr +++ W+ + n++ gD+++F++++ Pd.00g598580.m01 141 FTKTFKPRDLYS---LFIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIIFEFVK-- 226 667776666665...5699999988877765333.35679***************.678888899***********************765.. PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++ ++++fr Pd.00g598580.m01 227 QGVILIHIFR 236 6777999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MDKKLKCPLE RPSFRVFLVD DDFSQHLRIP PAFIKNFNGR RLGKCTMRGP TGKCWAVELE 60 QRRDGLFFHK GWPGFVKDHF IESEDFLIFD YDGGSEFDVT IYDKTCCEKD VKAAAKRHAS 120 DHLAETSTGG PISFRSENAC FTKTFKPRDL YSLFIPKSIA VTEGLMSSEG VLIKETIMLQ 180 DQTGRSWLVQ LHVTCDGRLE MKREWRTCRD TNQISHGDTI IFEFVKQGVI LIHIFRGRGE 240 GNSSSVVVLS GVLPRKSSQR PIAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 1e-16 | B3 family protein |