PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g598570.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 635aa MW: 71301.4 Da PI: 9.1703 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51 | 2.6e-16 | 22 | 107 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 s l+s rl +p +f+ +++g + s ++l +sg+ W+v l +k g ++ GW Fv+++ ++ gDf++F++dg+ +f +v +f++ Pd.00g598570.m01 22 SADLSSERLKIPERFMIHMEGRT--SGLVSLFGPSGNAWNVDL--IQKNGDLFFHHGWPAFVRDHFVECGDFLIFRYDGELCF--TVLIFDQ 107 66788999********9998884..458***************..77778899*************************99999..9999986 PP | |||||||
2 | B3 | 42.4 | 1.2e-13 | 247 | 327 | 13 | 94 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 s l +p kf +h ++++++l+l + +g+sW+v+ ++ +++l +GW Fv+ n++k gD+++F+l+++ ef+ +v Pd.00g598570.m01 247 SYTLNIPCKFSVAHL--PNCKVKLVLHNWKGESWTVNSVPsTRVHTSHTLCGGWMAFVRYNDIKLGDICIFELVHECEFRVHV 327 556899****99996..45999***************9445555667999*************************99996665 PP | |||||||
3 | B3 | 47.4 | 3.4e-15 | 456 | 547 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k++++ + s l +p +f +eh + +++++l++++g+ W+v+ + k++ +++ +GW Fv+ n+++ gD+++F+l+g+ +e Pd.00g598570.m01 456 VKIMKKFNICGSYTLKIPYQFSTEHlpN----YKTEIVLRNSKGECWTVNSVPDSKGRVvHTFCGGWMAFVRGNDVNIGDICIFELVGK--RE 542 5666555666667899*********533....3468***************5544444379999*********************9984..44 PP .EEEE CS B3 92 lvvkv 96 + v++ Pd.00g598570.m01 543 MQVHI 547 55655 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 635 aa Download sequence |
MAEEALKEMT NARRPHFFAF YSADLSSERL KIPERFMIHM EGRTSGLVSL FGPSGNAWNV 60 DLIQKNGDLF FHHGWPAFVR DHFVECGDFL IFRYDGELCF TVLIFDQSAC EKEAAFHSEC 120 GQDSSNFEKY MGRKRGREEA ASSGKLVDCV AKKMRDSSSE EGRGHEGVMC EEATCSKEIK 180 RAEKPGLDIV LCKANASIQN TCGKGDGLNV NGRVCVQMSS AHEIAQSFSS SNPYFVRIMK 240 SFNISGSYTL NIPCKFSVAH LPNCKVKLVL HNWKGESWTV NSVPSTRVHT SHTLCGGWMA 300 FVRYNDIKLG DICIFELVHE CEFRVHVQSG ETSSWLSAEL ALPSIKTFKS LSKIMTGNSP 360 KVHSKSIRKI EKADKIAPKK FQEAAFTNDA RKYGSTSKSL TKVSISQSKA ANKKLVNHRK 420 KVVEDELNPG SSLRMRLTLD EERAARSFTS CFPSFVKIMK KFNICGSYTL KIPYQFSTEH 480 LPNYKTEIVL RNSKGECWTV NSVPDSKGRV VHTFCGGWMA FVRGNDVNIG DICIFELVGK 540 REMQVHISGI GKKGQLNCNV VSTQLSCLDS KHAGQEATVS SNSRKRKRKE KKPQPLNHRE 600 RAADQRHQEV RPFLAFRGCE PFEGEFGSFN IVSWS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 584 | 589 | RKRKRK |
2 | 584 | 590 | RKRKRKE |
3 | 584 | 591 | RKRKRKEK |
4 | 584 | 592 | RKRKRKEKK |
5 | 586 | 593 | RKRKRKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-21 | B3 family protein |