PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g596200.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 420aa MW: 47844.5 Da PI: 8.9056 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.7 | 2.9e-16 | 142 | 275 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiy..kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWka 85 p GfrF Ptd+e+v +L+ + ++k + +++i+ +d++ k+eP+++ +k+ + ++++yf s +k ++ kr r + + g+W++ Pd.00g596200.m01 142 PLGFRFLPTDQEIVGSFLHTLLVERKplmPPYSNFIRACDLFgkKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDRsIGNGGTWSE 232 89******************988877787666778*****974478*****7544333335668888888877655..68888566799**** PP NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 t + k + + +++ +g k+ + + + + + e+t W+++ey+l Pd.00g596200.m01 233 TESFKLIEDDngNQNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 275 *******999555666********984..334469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence |
MTATSRMNFD LYDFKKLRWK SGIPATQSTP KPQSNKSSSL LHLLSRIKSI GSTMNLPCQP 60 SKNFSSVSKL GFFIRVLKIK KKVCEVLFHI SLDCGHLLRF CSSAGPSLPI SRSVPIQAPS 120 KQAILFLISS SKQAMAHHHN VPLGFRFLPT DQEIVGSFLH TLLVERKPLM PPYSNFIRAC 180 DLFGKKLEPS EIWNKYGGPQ LVDQDLYFLS GLKKLTPKRM DRSIGNGGTW SETESFKLIE 240 DDNGNQNPIG RKRKFRYENK GSEEHTWWLL DEYSLFVGPK NDYNDRSYDF DFVICRMRKN 300 DRASSKEINL KRSSQDQVQK KRSTNKKMKK DHQMGSTEES SSHVQQGYSS SITGGELVVS 360 YDDVDPNGLT FFEDNPIFNI EQILCETKVE DACSPSNSEN VDSSYCKWTE SYMEELMACI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01520.1 | 5e-08 | NAC family protein |