PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g593220.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 211aa MW: 24628.2 Da PI: 8.7918 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 96.9 | 1.3e-30 | 49 | 151 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+kv tpsdv++++r+v+pk++ae+h + +e +++ l +ed +g++W+++++y+ +s++yvltkGW +Fvk+++Lk+gD+v F++++ Pd.00g593220.m01 49 FEKVATPSDVGRLNRMVIPKQHAEKHfpshlS--EElcKGVLLNFEDGEGKVWRLRYCYWSSSQSYVLTKGWTRFVKEKKLKAGDVVRFERSR 139 99*************************99552..44448899************************************************988 PP SSEE..EEEEE- CS B3 87 rsefelvvkvfr 98 +e++ ++ + Pd.00g593220.m01 140 GEEKKIFIDCRP 151 788888877665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MLRKHSYTNE LEMYKLKLFN AGDDDAARKR IKCHVNLTEG YDHQREWLFE KVATPSDVGR 60 LNRMVIPKQH AEKHFPSHLS EELCKGVLLN FEDGEGKVWR LRYCYWSSSQ SYVLTKGWTR 120 FVKEKKLKAG DVVRFERSRG EEKKIFIDCR PRNVEVSGLG EMASRVEVEE PLSRVQVDDG 180 VVRLFGVNIV ETCSCIVDNN MRWRLGERIS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 4e-57 | RAV family protein |