PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g582570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 299aa    MW: 33175.1 Da    PI: 8.7601
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g582570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.91.5e-32142198158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d p+YVNaKQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hAl+R RgsgGrF
  Pd.00g582570.m01 142 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 198
                       57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSWNPIEREI PQSSSKDASF KVEFTPQVRY DAKHLGLQLL PDQGSSSTTQ TISQSQDRCN  60
SSESGEDEIC GKGVEGQMKP VYLLNNLDLM SNPSQVGYGN LMGRVPYPYA DPYFSGFLAA  120
YGPQAMMIAP TRVPLPLDLA EDGPIYVNAK QYHGILRRRQ SRAKLEAQNK LLKARKPYLH  180
ESRHLHALNR VRGSGGRFLS TKRLQQSDQN PSSSTHDVLD SVNLHQKDTQ DTESHHLGSS  240
EFVTAVATHS DIASVSHTND IFRQQDRRFS GIPSHMGGAM QFHGGLMRAG TQHCASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-51NF-YA family protein