PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g578360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 428aa MW: 46949.9 Da PI: 6.3224

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g578360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	9.8e-18	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ l ++v+++G g+W+++ r g++R++k+c++rw ++l Pd.00g578360.m01 24 KGPWTAAEDQTLMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 71 79******************************************9986 PP
2	Myb_DNA-binding	23.6	1.2e-07	77	107	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g +++eE+ +++++++++G++ W++ a+ Pd.00g578360.m01 77 KGVFSPEEERRILELHAKYGNK-WARMASQTK 107 789*****************.*998655 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLPPDSSGGG GGGNVVEGSD GLKKGPWTAA EDQTLMEYVR KHGEGNWNAV QRNSGLNRCG 60 KSCRLRWANH LRPNLKKGVF SPEEERRILE LHAKYGNKWA RMASQTKPTT LTSFPPFDPI 120 NTITSSFSSS STPSFTFHRP APILGAPLCH KRYRDSIVFS PPRFPNLKRN TSMFRTRSMP 180 DIASFQLTDS NSMPATASLT RTYSMSDNPS FEFPMTFDHS FPPLPRSQFD FSDNFLSPAG 240 SVYSVQSELP SNQVSQTQLQ ISIGNNLSSV AGATLAAAAD ETHSRSGLLD DLLQEADALE 300 AYGGGNNSRT TNGILGSSEE KHVLDGYDQW LQSTSSVDGH LYSMHKDFSK LFGSIPSSES 360 VSDWYSDSGE VSNAHSSGIT DVSLDMQQMA SMFPTDATAE HGRASSFREE EQLSYHMGMN 420 KVIMTQYS

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLPPDSSGGG GGGNVVEGSD GLKKGPWTAA EDQTLMEYVR KHGEGNWNAV QRNSGLNRCG  60
KSCRLRWANH LRPNLKKGVF SPEEERRILE LHAKYGNKWA RMASQTKPTT LTSFPPFDPI  120
NTITSSFSSS STPSFTFHRP APILGAPLCH KRYRDSIVFS PPRFPNLKRN TSMFRTRSMP  180
DIASFQLTDS NSMPATASLT RTYSMSDNPS FEFPMTFDHS FPPLPRSQFD FSDNFLSPAG  240
SVYSVQSELP SNQVSQTQLQ ISIGNNLSSV AGATLAAAAD ETHSRSGLLD DLLQEADALE  300
AYGGGNNSRT TNGILGSSEE KHVLDGYDQW LQSTSSVDGH LYSMHKDFSK LFGSIPSSES  360
VSDWYSDSGE VSNAHSSGIT DVSLDMQQMA SMFPTDATAE HGRASSFREE EQLSYHMGMN  420
KVIMTQYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	5e-45	MYB family protein