PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g575940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 1055aa    MW: 115090 Da    PI: 5.0633
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g575940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.32.2e-34311483128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                       pG++F+Ptdeelv +yLkk +egk+ ++ + i+ +d+++++P+dLp          +fFs+ d +y+++kr nr+t++g+ k+tgk +e++++
  Pd.00g575940.m01  31 PGYKFSPTDEELVGFYLKKAIEGKDAKFRDRIPVIDVCNHKPSDLP---------AFFFSQPDYRYKNSKRCNRSTDEGFYKSTGKVREIKAE 114
                       9***************************999**************9.........59**********************************98 PP

               NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++++g+k++L +y+grap+++kt+ vmhey+l
  Pd.00g575940.m01 115 qSQAVIGTKRILSYYEGRAPQAKKTKYVMHEYSL 148
                       556679**************************98 PP
2NAM81.22.3e-255386563128
               NAM   3 pGfr.FhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       pG++ F+Pt+eelv  yL++++egk+ e+ + i+ + +++k eP+dLp            Fsk d k+++ +r+nr+t++g+ k+tgk +e++
  Pd.00g575940.m01 538 PGVKlFSPTEEELV-GYLTNQIEGKDSEFRDSIPVIdHVCKREPRDLP---------AVCFSKPDYKNPKRDRRNRTTDEGFYKSTGKVREIK 620
                       566659********.9*************999****66*********9.........358********************************* PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ +++++g k++L f +gr p+++kt+ vmhey+l
  Pd.00g575940.m01 621 AEqSQAVIGNKRILPFCEGRGPQAKKTKYVMHEYSL 656
                       98456679**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1055 aa     Download sequence    
MVGSGGCGSG GGEMSSSSTT GEGDSKQMDL PGYKFSPTDE ELVGFYLKKA IEGKDAKFRD  60
RIPVIDVCNH KPSDLPAFFF SQPDYRYKNS KRCNRSTDEG FYKSTGKVRE IKAEQSQAVI  120
GTKRILSYYE GRAPQAKKTK YVMHEYSLTK TKLAQLGAQN NQQGELVLCH LKNKPAESAK  180
LKDDSICGDE LAEAAIVGEI AYSKDDQAAA TDMIQGPDEH LADKDALLGT ENRNECAEPS  240
CADLGENMDS TFLSPEQLAA TSAITPTSAT SFGGFGVGSP DGLFLSDFDD GFLLSDFDVL  300
FKEPFCADQP HQPPHPPHPH QPSPAPQSHQ PPPPSQPQNY CSSTLPSALC TKQGNVPSLY  360
NDDCSKQLSP TGNNISTNYH YEPVSNTAYG VQNGATDERL SEVYKTSTND HNESVSSEAY  420
FQQEENLGSI FHPIRPQDYA LLSPRNTELG DVMHATSIHV FTRRRCSEKN PTAKLYHKTR  480
LGKLQSIVLL SSPENQVLEV YSSKQQVPTP MVSVSDHSTA AAAASPGCEG VSGKKGLPGV  540
KLFSPTEEEL VGYLTNQIEG KDSEFRDSIP VIDHVCKREP RDLPAVCFSK PDYKNPKRDR  600
RNRTTDEGFY KSTGKVREIK AEQSQAVIGN KRILPFCEGR GPQAKKTKYV MHEYSLTKTG  660
LAKLGVGPNP NQKEEFVLCC LKNKSANSKK LKDVSISSNE LAEPAIGGEI ASNAEDDHAA  720
ATHMIQGPDE HLTDKDVLLG TDNRNECAES ESPNGFSPTD KNDISTCVGS PGSFDVPGGF  780
FLSDFDDLFK EPSCADLGEN MDSTFLPPEQ LAATSATTPT SATSFGGFGV GSPDGFWLSD  840
IDDLLKEPFC ADQPHQPPQP PLPHQPPPAP QLHQPPSPSQ LQNYCFSTLP SALCTKQGNV  900
PSLYNDDCSR QLSPTGNPPH PHQPPPPSQP QNYCSSTLPS ALCTKQGNVP SLYNDDCSKQ  960
LSPTVNNIST NYHHEPVRNT AYGVQNGATD ERFSEVYKIS TNDHNESVSS EACFQPEENL  1020
GILHPFRPQD YTLLSPRNTE LGDVMHANNY IDMQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-35NAC family protein