PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g575930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 381aa MW: 42788.6 Da PI: 6.0572

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g575930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.2	1e-29	6	126	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l pG++F+Ptd+elv++yLkk+++g++ e++++i+e+++ ++eP+dLp +fFs+ d +++g+ r+t++g+ k+tgk +e+ Pd.00g575930.m01 6 LLPGIKFSPTDKELVSFYLKKRIAGEDSEFSNIIPEINLREHEPHDLP--------TEFFFSEPDYMSPSGDSCYRTTNKGFYKSTGKPREIE 90 579*************************999**********9........359****************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++++g k+ + fy+grapk + t+ v+h+++l Pd.00g575930.m01 91 DElSKAVIGEKRYMPFYEGRAPKHKPTEYVLHQFSL 126 9988899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MKAMGLLPGI KFSPTDKELV SFYLKKRIAG EDSEFSNIIP EINLREHEPH DLPTEFFFSE 60 PDYMSPSGDS CYRTTNKGFY KSTGKPREIE DELSKAVIGE KRYMPFYEGR APKHKPTEYV 120 LHQFSLTKTE LAKLAPNREF VLNHLTIKKG STKAHNPKPN YKKRKYDSNC DKLAEHGIPG 180 YIASNYEDDQ AAAAANMIPE PEEHLADEDV LLGSENRNEC VESESANGSR LINNNDSSTL 240 AVGSPGGCFP SGYGNVAAYD PFREVSFQPE GNLISPFHPS SLRDIPLRNN MHYTYSDSDL 300 LEPLGGVYDS YSGVGREKNT ELHHGWDTHT SISASIHSCL HTREVLQEES DCKAVSQDKV 360 RDAAEYCFAL HLKTKSWKHT V

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MKAMGLLPGI KFSPTDKELV SFYLKKRIAG EDSEFSNIIP EINLREHEPH DLPTEFFFSE  60
PDYMSPSGDS CYRTTNKGFY KSTGKPREIE DELSKAVIGE KRYMPFYEGR APKHKPTEYV  120
LHQFSLTKTE LAKLAPNREF VLNHLTIKKG STKAHNPKPN YKKRKYDSNC DKLAEHGIPG  180
YIASNYEDDQ AAAAANMIPE PEEHLADEDV LLGSENRNEC VESESANGSR LINNNDSSTL  240
AVGSPGGCFP SGYGNVAAYD PFREVSFQPE GNLISPFHPS SLRDIPLRNN MHYTYSDSDL  300
LEPLGGVYDS YSGVGREKNT ELHHGWDTHT SISASIHSCL HTREVLQEES DCKAVSQDKV  360
RDAAEYCFAL HLKTKSWKHT V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	165	PKPNYKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	2e-26	NAC family protein