PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g575910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 377aa MW: 42048.4 Da PI: 4.2038 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 46 | 1.6e-14 | 19 | 70 | 2 | 53 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka 53 pGfrF Pt+e lv +yLkkk+egk+ +++++i+e+d++k+eP d p+++k+ Pd.00g575910.m01 19 LPGFRFYPTEEVLVGYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVPANYKK 70 69***************************999**************953332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MSSMSRTTME EGDSVPVVLP GFRFYPTEEV LVGYYLKKKI EGKDSNFSHI IPEIDVCKHE 60 PCDVPANYKK VKADSGGCIA SNSEDDQAAA TDMISEPLEH LASQEVGDVL NGNGDHDECT 120 ESPNGTGLID NNDISSCDDD EIDTWIFYDF DNQAACDLFQ EQYCAEPGEN MDSLLPPPQP 180 PLPPLPQDYC SSTQQSSLYT NQGNVPYVYD GDCNRQQSPI GDRNSYLTHK NNMSMNNQIE 240 PVSNITYGVQ NRATGESNSE VNNNSTNDFK EPVSNITCNF NNGAPNERIS KACSQPKENL 300 GSCFDPFQLQ DFTLLSPMNL ELGDFEHDNK LYWHAMSCHT LPLFMFIHGR CCEKNPTAKL 360 YHKTRLEKLQ SIALLSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-11 | NAC family protein |