PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g575900.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 539aa MW: 60213.1 Da PI: 4.5578

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g575900.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	82.8	7.2e-26	62	183	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 +l ++L++ ++gk ++ ++i++++ yk+ePw+L + + + wy Fs+ ++kya++ r nr t++g+Wk tgk +e++s+ ++++ Pd.00g575900.m01 62 QLFLRFLERMMQGKASQARRIIPDINFYKYEPWELAgRmlpDSPYQPRMWYSFSRPHHKYANSPRCNRLTAKGFWKITGKPREIKSRqlSESV 154 67889***********999**********8434442233677**********************************9766666 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 + k+tL+f+ gr +k +kt Wv +ey l Pd.00g575900.m01 155 TCKKRTLTFHLGRPSKQSKTGWVKQEYYL 183 77789********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES 60 IQLFLRFLER MMQGKASQAR RIIPDINFYK YEPWELAGRM LPDSPYQPRM WYSFSRPHHK 120 YANSPRCNRL TAKGFWKITG KPREIKSRQL SESVTCKKRT LTFHLGRPSK QSKTGWVKQE 180 YYLTSTVPGS NLSGLVLFRM KNKSADYESD NKQQQDVSIY DESADPAIGG DDMAFNSQDD 240 QAAANHMIPE AEEHPLGNGN HNDGEPGGFV SSDSDIMKEL CAQLGLEPPQ LGNVPGTGDY 300 LASNSDNQAA AIHPKITDEE ELLAYKKLER VLLGSGNPDN GEPGSCVSSD MLSELCAQLG 360 EDLDSPFPPP GPPELGNAPD VYTDECTNWP TPIEDNDSSL PNKNNIPSNY DSKPVSNTAS 420 DFENQTKDER IPEVYSQSEE NLQSFFRSLE EEDYTLPSPI LSVEQGDVLH ANNYIGCNES 480 QYAALFPHKS ECRVVSQAKV RKLQLIVLLF KSFEAGMEWA AGTKLKGSFT FLEASPMVL

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES  60
IQLFLRFLER MMQGKASQAR RIIPDINFYK YEPWELAGRM LPDSPYQPRM WYSFSRPHHK  120
YANSPRCNRL TAKGFWKITG KPREIKSRQL SESVTCKKRT LTFHLGRPSK QSKTGWVKQE  180
YYLTSTVPGS NLSGLVLFRM KNKSADYESD NKQQQDVSIY DESADPAIGG DDMAFNSQDD  240
QAAANHMIPE AEEHPLGNGN HNDGEPGGFV SSDSDIMKEL CAQLGLEPPQ LGNVPGTGDY  300
LASNSDNQAA AIHPKITDEE ELLAYKKLER VLLGSGNPDN GEPGSCVSSD MLSELCAQLG  360
EDLDSPFPPP GPPELGNAPD VYTDECTNWP TPIEDNDSSL PNKNNIPSNY DSKPVSNTAS  420
DFENQTKDER IPEVYSQSEE NLQSFFRSLE EEDYTLPSPI LSVEQGDVLH ANNYIGCNES  480
QYAALFPHKS ECRVVSQAKV RKLQLIVLLF KSFEAGMEWA AGTKLKGSFT FLEASPMVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	9e-21	NAC family protein