PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g575880.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 461aa MW: 52136.6 Da PI: 4.7161 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.1 | 2.9e-22 | 39 | 153 | 18 | 128 |
NAM 18 yLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvgl 102 +Lk+ ++ ++++i+e+d yk+ePwdL + + + w+ Fs+ d ky +r+nr t++g+Wk tg+ +ev+s+ +++l+ Pd.00g575880.m01 39 FLKQLMQ----GMASIIPEIDFYKHEPWDLAgAglmfpDSPYQARTWFCFSRPDYKYLDRTRRNRLTEKGFWKITGQPREVKSRqlSKSLTCK 127 3333333....33468**************843676663334788**************************************9777777999 PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kktL+f+ gr +k++ktd v +ey l Pd.00g575880.m01 128 KKTLTFHLGRPKKSSKTDLVKQEYYL 153 9***********************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MVNLLWKKIN GKDCQVMPEI NYKPWDLPDN ESIPLFLRFL KQLMQGMASI IPEIDFYKHE 60 PWDLAGAGLM FPDSPYQART WFCFSRPDYK YLDRTRRNRL TEKGFWKITG QPREVKSRQL 120 SKSLTCKKKT LTFHLGRPKK SSKTDLVKQE YYLTPTDPGS NPNQMSGLVL YRVKYRSADY 180 ESDNNCVLGT GNLNDGEPGG FVSSDFDDMI QEPCDQQEHL DSPSPPPEPP RPHQLPQLGN 240 VHGSTGDYIA SNSDNQAAAI HHMITDEEEL LAYKELERVL LGSGNPDDGE LCTCVSSDML 300 RELCAQLGED LDSPFPPPGP PELGNAPDVY TDECSSWPTP IEDNDSSLPN KNNIPTNYYS 360 KPVSNTASDF ENQTKDERIP EVYSQSEENL QSFFRSLEVL LEESECRVVS QHKVRKLQLI 420 VLLFKPFEAG MEWAAGTTLK GSFMFLEASP SSRKPSSPMV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 6e-19 | NAC family protein |