PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g575810.m03 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 947aa MW: 109181 Da PI: 5.063 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.1 | 7.3e-19 | 5 | 77 | 55 | 127 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +fFs+ +y+++k+++r+t+ g+Wk tg+++e+ ++ +++++g k++L+fy g+a+++ ktdWvmhey Pd.00g575810.m03 5 DENGFFFSQP--EYTQKKNTKRSTEVGFWKITGREHEIRTRdrRRTVIGKKRILTFYIGHARNSDKTDWVMHEYY 77 4556888876..5677899********************99767778***************************7 PP | |||||||
2 | NAM | 32.2 | 3.1e-10 | 320 | 396 | 33 | 115 |
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapk 115 i++ i k P+ ++ +k+++++w+fF k +k +ratk+g+Wk t kd+ ++++ +++++ k++L+fy gr ++ Pd.00g575810.m03 320 SITKSSIDKKVPQGNKSLIKSDDENWFFFYKYKK-------GSRATKEGFWKITSKDRVIKARdNRTVIAKKRILTFYIGRVHE 396 377777888888877777889999****998644.......579999**************9955666888999****988766 PP | |||||||
3 | NAM | 28.2 | 5.4e-09 | 676 | 717 | 12 | 54 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ Pd.00g575810.m03 676 EELVDHYLKNKRQDRDFHV-DHIPEIDICKYDPWEIPGLFTEQ 717 9******************.89**************9544333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 947 aa Download sequence |
MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKITGREHEI RTRDRRRTVI GKKRILTFYI 60 GHARNSDKTD WVMHEYYIPK AHPNANQRDF VLCHCHLKKN VKNSDEIHTD VATTCDEGEP 120 STAFDVENQP KHGMDIQEED TQQPENLDYF EQTKDRWLAS SCSNNDHNAT FADNDSESEL 180 EERLRPFNTK PFHAGELSLE MLYELQHGSS QSIQDTDIML HNQLSRQAAS SVNVAPKPQT 240 DRVQLEIGIA LGGYGIRLRS DRIALRDTSA DEYYTREKTP RITYPPEKAK EPEKPKPAPE 300 KPKAPAYHRT AADLAEKQIS ITKSSIDKKV PQGNKSLIKS DDENWFFFYK YKKGSRATKE 360 GFWKITSKDR VIKARDNRTV IAKKRILTFY IGRVHENTDV ATTCDEGETS THNASDFENQ 420 PVHGMFQMQE DTRPRENLDY FERTRDLWLA NSFSNNDHDA FQSDFEANDP EAEAFVRSVL 480 NDPQCDTDTE PIHVSLQGRR FTSSPSTRDT EVILHNQLSR PAASPVHVAP QPQTSELQLQ 540 SGTSERTHRP QPKSINVLRR TSAVNVDAFN VSINCIRLAT DDEYYTKERA RRRTYPPVGK 600 LREIKLQQSK AKEPEERRTS VDLPEKQISI TKSSIDRKDG WNIADSKLVL EMQKTDHRWI 660 KIQDENQPIP MESGKEELVD HYLKNKRQDR DFHVDHIPEI DICKYDPWEI PGLFTEQDSP 720 YHASPDPQLA ERDFVLYRMK QNPDKKDTSV FAEGEPSSYN WSNCEDQAAD DVTPESQDHS 780 PSTLQSPAYI ELGDVLQVND FNEDCNDMQS PFGDYDYSVT HKNYFSTCDE VAYDMSQEQA 840 QYYHSFTLPS PIYSELGSVP HDDVYNNEWQ SAYANFENQT TDERISEECP QPKENLRSIL 900 SASQLADYTS QSLMNTEEYQ MRNCEIGIEG AAGMSWEGSF FNFPLKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 1e-13 | NAC family protein |