PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g575810.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 943aa MW: 108647 Da PI: 5.063 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.1 | 7.3e-19 | 5 | 77 | 55 | 127 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +fFs+ +y+++k+++r+t+ g+Wk tg+++e+ ++ +++++g k++L+fy g+a+++ ktdWvmhey Pd.00g575810.m02 5 DENGFFFSQP--EYTQKKNTKRSTEVGFWKITGREHEIRTRdrRRTVIGKKRILTFYIGHARNSDKTDWVMHEYY 77 4556888876..5677899********************99767778***************************7 PP | |||||||
2 | NAM | 32.2 | 3.1e-10 | 320 | 396 | 33 | 115 |
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapk 115 i++ i k P+ ++ +k+++++w+fF k +k +ratk+g+Wk t kd+ ++++ +++++ k++L+fy gr ++ Pd.00g575810.m02 320 SITKSSIDKKVPQGNKSLIKSDDENWFFFYKYKK-------GSRATKEGFWKITSKDRVIKARdNRTVIAKKRILTFYIGRVHE 396 377777888888877777889999****998644.......579999**************9955666888999****988766 PP | |||||||
3 | NAM | 28.2 | 5.4e-09 | 672 | 713 | 12 | 54 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ Pd.00g575810.m02 672 EELVDHYLKNKRQDRDFHV-DHIPEIDICKYDPWEIPGLFTEQ 713 9******************.89**************9544333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 943 aa Download sequence |
MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKITGREHEI RTRDRRRTVI GKKRILTFYI 60 GHARNSDKTD WVMHEYYIPK AHPNANQRDF VLCHCHLKKN VKNSDEIHTD VATTCDEGEP 120 STAFDVENQP KHGMDIQEED TQQPENLDYF EQTKDRWLAS SCSNNDHNAT FADNDSESEL 180 EERLRPFNTK PFHAGELSLE MLYELQHGSS QSIQDTDIML HNQLSRQAAS SVNVAPKPQT 240 DRVQLEIGIA LGGYGIRLRS DRIALRDTSA DEYYTREKTP RITYPPEKAK EPEKPKPAPE 300 KPKAPAYHRT AADLAEKQIS ITKSSIDKKV PQGNKSLIKS DDENWFFFYK YKKGSRATKE 360 GFWKITSKDR VIKARDNRTV IAKKRILTFY IGRVHENTDV ATTCDEGETS THNASDFENQ 420 PVHGMEDTRP RENLDYFERT RDLWLANSFS NNDHDAFQSD FEANDPEAEA FVRSVLNDPQ 480 CDTDTEPIHV SLQGRRFTSS PSTRDTEVIL HNQLSRPAAS PVHVAPQPQT SELQLQSGTS 540 ERTHRPQPKS INVLRRTSAV NVDAFNVSIN CIRLATDDEY YTKERARRRT YPPVGKLREI 600 KLQQSKAKEP EERRTSVDLP EKQISITKSS IDRKDGWNIA DSKLVLEMQK TDHRWIKIQD 660 ENQPIPMESG KEELVDHYLK NKRQDRDFHV DHIPEIDICK YDPWEIPGLF TEQDSPYHAS 720 PDPQLAERDF VLYRMKQNPD KKDTSVFAEG EPSSYNWSNC EDQAADDVTP ESQDHSPSTL 780 QSPAYIELGD VLQVNDFNED CNDMQSPFGD YDYSVTHKNY FSTCDEVAYD MSQEQAQYYH 840 SFTLPSPIYS ELGSVPHDDV YNNEWQSAYA NFENQTTDER ISEECPQPKE NLRSILSASQ 900 LADYTSQSLM NTEEYQMRNC EIGIEGAAGM SWEGSFFNFP LKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 1e-13 | NAC family protein |