PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g575800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 718aa MW: 82075.8 Da PI: 7.1608

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g575800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.6	1.6e-16	10	73	66	127
NAM 66 kkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 ++++++++++r+t+ g+Wk tg+++e+ ++ +++++g k++L+fy g+ +++ ktdWvmhey Pd.00g575800.m01 10 QSTPKKNNTKRSTEVGFWKITGREHEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 73 56778999******************99767778*************************7 PP
2	NAM	69	1.3e-21	312	386	51	127
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +k+++++w+fFs+ + ++++knr+t++g+Wk tg++++++++ +++++g k++L+fy+gr +++e+t+Wvmhey Pd.00g575800.m01 312 LKSDDENWFFFSRPEY---NKHKKNRTTQEGFWKITGREHAIKARdNRSVIGRKRILTFYRGRVRNSERTNWVMHEYY 386 4568899**99876...4579****************9967778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MRTGSSSVNQ STPKKNNTKR STEVGFWKIT GREHEIRTRD RRRTVIGKKR ILTFYIGHGR 60 NSDKTDWVMH EYYIPKAHPN ANQRDFVLCH LKKNVKKSDE IHTDVATTCD EGEPSTHNAS 120 DFEHPPAHDI LEEYVDYIAL QPAFAANDPD VEFAEFLETV LVEPDGGVTS DTDMEPFHGH 180 VQAEMLSEVF YGSSQPSRDT GGIFRNQISP QAASSVNVAP KPQTDRVQLN SDTSQGAHGP 240 RHQPGPIIDT SADEYYTKEK TRRRTNPPAK PKQPAYRRTA AELPQKQISL TNSSQDKKVA 300 QGKNAEKESS LLKSDDENWF FFSRPEYNKH KKNRTTQEGF WKITGREHAI KARDNRSVIG 360 RKRILTFYRG RVRNSERTNW VMHEYYIPDD NPNAQRDFVL CRLKKNVKRS DENTDVAATC 420 DEGETHNASD VENQRVNDMN MEDTWPPENL DYFERARDLL LANSPSNNDH NAFQPAFSAH 480 DQEANFDDFL RTLIVEPQFG VTSDTGREPV HHRVQSLQMR CEPQIPYELL QCGSSQSRRD 540 TDVILHNQLS RQASSSVNVA SKPGTYQREH RPQQQSGPII VFRDTSADEY YTTEKTRRIT 600 YPPEKPKEPE KPKPTPEKPK EPPYPRTAAD FPQKQISITK SSIDKKVPQG MSEEKDNLNG 660 SREESIRGTQ DALGFNAKNA VLYPREAEKG IWPEDYTLSD HARLPVVLSP ERMWCSQS

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MRTGSSSVNQ STPKKNNTKR STEVGFWKIT GREHEIRTRD RRRTVIGKKR ILTFYIGHGR  60
NSDKTDWVMH EYYIPKAHPN ANQRDFVLCH LKKNVKKSDE IHTDVATTCD EGEPSTHNAS  120
DFEHPPAHDI LEEYVDYIAL QPAFAANDPD VEFAEFLETV LVEPDGGVTS DTDMEPFHGH  180
VQAEMLSEVF YGSSQPSRDT GGIFRNQISP QAASSVNVAP KPQTDRVQLN SDTSQGAHGP  240
RHQPGPIIDT SADEYYTKEK TRRRTNPPAK PKQPAYRRTA AELPQKQISL TNSSQDKKVA  300
QGKNAEKESS LLKSDDENWF FFSRPEYNKH KKNRTTQEGF WKITGREHAI KARDNRSVIG  360
RKRILTFYRG RVRNSERTNW VMHEYYIPDD NPNAQRDFVL CRLKKNVKRS DENTDVAATC  420
DEGETHNASD VENQRVNDMN MEDTWPPENL DYFERARDLL LANSPSNNDH NAFQPAFSAH  480
DQEANFDDFL RTLIVEPQFG VTSDTGREPV HHRVQSLQMR CEPQIPYELL QCGSSQSRRD  540
TDVILHNQLS RQASSSVNVA SKPGTYQREH RPQQQSGPII VFRDTSADEY YTTEKTRRIT  600
YPPEKPKEPE KPKPTPEKPK EPPYPRTAAD FPQKQISITK SSIDKKVPQG MSEEKDNLNG  660
SREESIRGTQ DALGFNAKNA VLYPREAEKG IWPEDYTLSD HARLPVVLSP ERMWCSQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	1e-21	NAC family protein