PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g574610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 1723aa MW: 187670 Da PI: 6.3392 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.1 | 4.9e-09 | 805 | 848 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + ++ +++Ia+ + ++t +c+++++k+ Pd.00g574610.m01 805 NPWTPEEKELFIEKLTTCRKD-FRKIASFLD-HKTTADCVEFYYKH 848 69*****************99.*********.************97 PP | |||||||
2 | Myb_DNA-binding | 26 | 2.2e-08 | 1024 | 1064 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g574610.m01 1024 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1064 6*****************99.*********.********8776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1723 aa Download sequence |
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA 240 TPMQSPSGGA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANCDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPSP LQIHSSGDAD AENMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDLMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV 600 SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL 660 IKEKFSMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KLCRNSLKMP ALILDKKEKM 780 VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCRKDFRKIA SFLDHKTTAD 840 CVEFYYKHHK SVCFEKTKKK ADMTKQGKSS AKTYLISNGK KWNREMNAAS LDILGAASAI 900 AAHADGSMRS RQAYSERLFL GGYRNANPSQ GDDTTVERSC SFDAIGNERE TVAADVLAGI 960 CGSLSSEAVS SCITSSIDPG EGYREWKCQK VDSLARRPLM PDVMQNVDDE TCSEESCGEM 1020 DPSDWTDAEK SSFIQAVSSY GKDFAMISRC VRTRSQHQCK VFFSKARKCL GLDLVHPVAG 1080 NGTSVGDDVN GGGSDTEDAC VLETGSGISS DKSGCRMNED MPLSVINMDD ESDPAETMNL 1140 QTGPLRSEEN NVMGQLDHEG GQTLKSPVSD ALEVEDRSNL VLDDADCVRD AQKSQVFSAD 1200 ALKDDVAEEG ILIAESEPVG GGINFDPTNP GMDGEKLMGE LSSDGNTDTS RCSLPGSVHD 1260 SNSSGNASAP AGGGSCSGFS LNPECLHQVS VGLNSMQKPS VISMPHETRH APADSVSQDS 1320 AKIECEKAFN QDRLSSTLDL QEGREPKSVG IDECHQHLPG LPIYTNVESS QVLKGYPLQM 1380 ATKKDTNGDV TSGNLSEVQN FSKPDRKING HYMTKDGFLQ FGNCKPQCSE VDFPLAPQKV 1440 EQPVGPPKAH SWSSSDSDKP SRNGDVKLFG KILSNPSSLS KSSSNIHENE EKGAHNHKLS 1500 NTSSNLKFTG HHNADGNSSL LKFDCSSYLG IEKVPRRSYG FWEGNKVHSG YPSFSDSAIL 1560 LAKYPAAFGN FPTTSSKMEQ QPLQAVVKNN DRNINGVSVF PSREISGSNG VVDYPVFSRS 1620 RDGAKVPPFT VDVKQQQRQD VFDMPRRNGF DTISSLQQQG RGIVGMNVVG RGGILVGGPC 1680 TGVSDPVAAI RMHYAKTEQY GGQPGSMIRE EESWRGGKGD VGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52250.1 | 1e-177 | MYB family protein |