PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g573230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 627aa    MW: 69548.7 Da    PI: 5.5697
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g573230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.84.9e-1112775841317
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g573230.m01 277 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 369
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g573230.m01 370 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 457
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g573230.m01 458 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 544
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWre 317
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+
  Pd.00g573230.m01 545 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRK 584
                       **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MGSIKSEISC TSDLKPPSPN ESTTMSISMS ESKKTTTPPS SEMEQSSLTP PSLNFPTLKF  60
ELDGDVEVQS PDHSIWESLL FSEQFDTDFM VLSPVPNNMP DSPQPGASLS AAHNNYNYYN  120
YAQSMQGQSL SGCSPPRFSP HLGAFSSTHN PKGKGLSPLR RVFNSPVNQY MQPADQNMQS  180
IPPASIEDFL DDYQRDSFIA AYQNPTTTTT TSSSKMSGTS SQSYNPHDMP TSSTVPAASL  240
DCLPMQNSSR FSRSNLNYMA PNLPMAPEQE QDSGLQLVHL LLACAEAVAK EDFMLARRYL  300
HHLNRVVTPL GDSMQRVASC FTEALSARLT ATLTTNPAAS APKPFSPFPP NSLEILKIYQ  360
IVYQACPYIK FAHFTANQAI FEAFESEERV HVIDLDILQG YQWPAFMQAL AARPGGAPFL  420
RITGVGPCIE AVKETGRCLT ELALSLHVPF EFHAVGEQLE DLKPHMFNRR IGEALAVNTV  480
NRLHRVPGNY LGNVLAMIRD QAPNIVTLVE QEASHNGPYF LGRFLEALHY YSAIFDSLDA  540
TFPPDSAQRA KVEQYIFAPE IRNIVACEGA ERTERHERLE KWRKDDGGQR LLALGVAGQV  600
YNGCFCMEML NLLMISFNLF LLLRTRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-74GRAS family protein