PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g572310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 564aa MW: 62414.5 Da PI: 5.9865

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g572310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.5	2.7e-14	31	121	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffkv+ s++l lp kfa + ++ +++ +led+ g +Wev + ++ g+ l++GW+ F +++Lk g+f++F ++++s f Pd.00g572310.m01 31 FFKVM--IGDRFSKLLFLPPKFAPTVsALV---NQKAVLEDSLGLQWEVII--SRINGSLSLKQGWNAFSLDHDLKIGEFLIFNYISSSHF-- 114 77777..444555679*****9996555...347***********..9999999************************98999.. PP EEEEE-S CS B3 93 vvkvfrk 99 v +++k Pd.00g572310.m01 115 IVNIYDK 121 9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ 60 KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVNIYD 120 KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH 180 LHETNDTGKA LIVTENDSTQ DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD 240 LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAEIPSD 300 ASKFDGSRIN NSSETKAQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN 360 KCPTAGRSES LSGNEVVISG KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS 420 DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC 480 QELPMGLPIR MTYRGRPKTD RRRDPVMRLW PVLYIERSYF KTLASGWEAF SKANNIQPGD 540 ECVIGIENGV EGICSVRIIS KREI

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ  60
KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVNIYD  120
KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH  180
LHETNDTGKA LIVTENDSTQ DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD  240
LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAEIPSD  300
ASKFDGSRIN NSSETKAQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN  360
KCPTAGRSES LSGNEVVISG KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS  420
DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC  480
QELPMGLPIR MTYRGRPKTD RRRDPVMRLW PVLYIERSYF KTLASGWEAF SKANNIQPGD  540
ECVIGIENGV EGICSVRIIS KREI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	8e-12	B3 family protein