PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g569280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 287aa    MW: 32445 Da    PI: 10.5016
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g569280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.51.2e-1351140599
                       -..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..E CS
                B3   5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLk.egDfvvFkldgrsefelv 93 
                       l     ++++++++p kf++++  +++  e   l+l+d+s  sW+v++   k++++ +++++GW+eF k+n L  +++++ + ++g++ f   
  Pd.00g569280.m01  51 L---AGFNTDCVRVPQKFLKHMlkDLS--ERAILKLKDSSDSSWTVTV--HKTREGaVYFKNGWEEFIKDNSLGtDNEMLQLFYEGKMHF--S 134
                       4...55677889*******77775444..5569***************..5555555****************97788888888887888..8 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v++f k
  Pd.00g569280.m01 135 VRIFGK 140
                       888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MASQSTQSAA AVTSQQNPQK HRASLSAQTE EKMARKVSKN EEKKHSFFKL LAGFNTDCVR  60
VPQKFLKHML KDLSERAILK LKDSSDSSWT VTVHKTREGA VYFKNGWEEF IKDNSLGTDN  120
EMLQLFYEGK MHFSVRIFGK NGIERSEELS SSEEEEEDSE DNTSEDLEAD FTKIGSLHNS  180
LAKNTTKRPR GRPRKYPVSS SKPRPLKSCK VESGEESKKR RKILKTAHLR IWKVLSLKLS  240
NLTSLILKAS LDKLNVSSSP QPSLGSIFLK AKVLRLSWKM QRGGNGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187195KRPRGRPRK
2218222KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16210.22e-12B3 family protein