PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g566830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 839aa MW: 92506.4 Da PI: 7.3123

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g566830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	7.6e-18	326	425	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e Pd.00g566830.m01 326 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PE 416 89************************555567778***********99899999999.*******************876.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++l +++++ Pd.00g566830.m01 417 GKLIMGFRK 425 777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MEPRTCMNAA CGTSSSIEWK KGWALRSGGF ANLCLKCWSA YEQSIFCDIF HSKESGWREC 60 ILCGKRLHCG CIASMFLLDL LDGGGVKCIK CAKSSEPQPI LSDEKPDGLG ISKISELQPT 120 AQDNQLDGTN VEKLKLIQLG NNKDCNGFRN LLQLQNNDAN GLLQKMKHAD TPPPVGEIGG 180 TCLSNFNLAS NGSSEAPKAE VFKANLGIND IYDSLPQTNL SMSLGAPLGK ANPVPAAMFD 240 EREHSKTSSP LLPGARSRNL FPKPPKLALG AGLEENSTIA SHARVARPPA EGRGRNQLLP 300 RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG 360 LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI 420 MGFRKASNSV AMQSLKGSMD PHLNALSKHL TTASGDISWH KSEKQEGRTR EGMLLPSLLV 480 PERKRTRNIG SKSKRLLIDS QDALELKLTW EEAQDLLRPP PAAKPSTIMI EDLEFEEYEE 540 PPVFGKRSIF IVRLTGEHEQ WAQCDSCSKW RRLPVDVLLP SKWTCADNAW DQSRRSCSAP 600 DELAPRELES FLRMSKEFKK RRTVADNRPT QEHESSGLDA LANAAILGDN AADPGTASVA 660 TTTKHPRHRP GCSCIVCIQP PSGKGKHKPN CTCNVCNTVK RRFKTLMINK KKRQSEREAE 720 IAYRNQHAWG PRDEAEVDST SRHVSSHVDP SDNEARSANE SDSKSQSKVA ETGKGILDLN 780 CHPGREGELQ AGPNHATSST SHVPPQATNE SEDQHNENQC QEQESGGEER PDQGQDDPL

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MEPRTCMNAA CGTSSSIEWK KGWALRSGGF ANLCLKCWSA YEQSIFCDIF HSKESGWREC  60
ILCGKRLHCG CIASMFLLDL LDGGGVKCIK CAKSSEPQPI LSDEKPDGLG ISKISELQPT  120
AQDNQLDGTN VEKLKLIQLG NNKDCNGFRN LLQLQNNDAN GLLQKMKHAD TPPPVGEIGG  180
TCLSNFNLAS NGSSEAPKAE VFKANLGIND IYDSLPQTNL SMSLGAPLGK ANPVPAAMFD  240
EREHSKTSSP LLPGARSRNL FPKPPKLALG AGLEENSTIA SHARVARPPA EGRGRNQLLP  300
RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG  360
LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI  420
MGFRKASNSV AMQSLKGSMD PHLNALSKHL TTASGDISWH KSEKQEGRTR EGMLLPSLLV  480
PERKRTRNIG SKSKRLLIDS QDALELKLTW EEAQDLLRPP PAAKPSTIMI EDLEFEEYEE  540
PPVFGKRSIF IVRLTGEHEQ WAQCDSCSKW RRLPVDVLLP SKWTCADNAW DQSRRSCSAP  600
DELAPRELES FLRMSKEFKK RRTVADNRPT QEHESSGLDA LANAAILGDN AADPGTASVA  660
TTTKHPRHRP GCSCIVCIQP PSGKGKHKPN CTCNVCNTVK RRFKTLMINK KKRQSEREAE  720
IAYRNQHAWG PRDEAEVDST SRHVSSHVDP SDNEARSANE SDSKSQSKVA ETGKGILDLN  780
CHPGREGELQ AGPNHATSST SHVPPQATNE SEDQHNENQC QEQESGGEER PDQGQDDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein