PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g565460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 505aa MW: 59445.4 Da PI: 5.1349

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g565460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.4	4.3e-22	134	217	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++++etrtgC a++++++ ++++w+v++++leHnH + Pd.00g565460.m01 134 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEAN-----SRKKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 217 69**************************************99888.....88999****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MTGENTFSPS DQAFSANSNL HITIQEGSQN SEQLLENENN DLENDCEQLF EIEGNEPESE 60 RDDTSDQLFD IQSNDHENDG GDINEHLFEI EGTDHESSRD DRTIIDYQNG GSQEKAYPPP 120 VVGLEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTIKEAN 180 SRKKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE RAQNSKSHKR MDSGAKRKME 240 PTVDVEVRTI KLYRTPVVDA VVLEKKRQEE AHNDFESREL TPMLRTRCYY ELQLSKFYTK 300 DVFLKFQDEV VMMTSCFSIT QVHTNGPIVT YMIKEREGEE IMRDNNRNFE VMYDKAGAEV 360 RCMCSCFNLN GYLCRHALCI LNYNGVEEIP FQYILSRWRK DLKRLYVPDL GSNNVDITNP 420 VQWFDHLYRR AMQVVQEGMI SQDHYMVSWQ AFKESLNKEK QERKRPAIYC MNRRVEPRKT 480 AEYREFSEKD LQRCFWHVQE DESCR

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MTGENTFSPS DQAFSANSNL HITIQEGSQN SEQLLENENN DLENDCEQLF EIEGNEPESE  60
RDDTSDQLFD IQSNDHENDG GDINEHLFEI EGTDHESSRD DRTIIDYQNG GSQEKAYPPP  120
VVGLEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTIKEAN  180
SRKKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE RAQNSKSHKR MDSGAKRKME  240
PTVDVEVRTI KLYRTPVVDA VVLEKKRQEE AHNDFESREL TPMLRTRCYY ELQLSKFYTK  300
DVFLKFQDEV VMMTSCFSIT QVHTNGPIVT YMIKEREGEE IMRDNNRNFE VMYDKAGAEV  360
RCMCSCFNLN GYLCRHALCI LNYNGVEEIP FQYILSRWRK DLKRLYVPDL GSNNVDITNP  420
VQWFDHLYRR AMQVVQEGMI SQDHYMVSWQ AFKESLNKEK QERKRPAIYC MNRRVEPRKT  480
AEYREFSEKD LQRCFWHVQE DESCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-70	FAR1 family protein