PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g560900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 391aa MW: 44433.7 Da PI: 9.1534 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.5 | 2.5e-18 | 10 | 99 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +l+ s++l+ ++l++p +f++++g + s+ tl ++g++W+v + +k ++++++ +GW+eF + +++g f++F+++g+s+f +v++f Pd.00g560900.m01 10 HKLILSSTLQAKQLMIPENFVKKFGDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHIF 98 5677789999999***********988..88999999***********..**********************************9999..88888 PP - CS B3 98 r 98 + Pd.00g560900.m01 99 N 99 5 PP | |||||||
2 | B3 | 59.2 | 7.5e-19 | 277 | 366 | 4 | 97 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ yr+++ l++GW eF +n+L egD++vF+l + +e l+v+ Pd.00g560900.m01 277 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSSDGRQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKVT 364 78899******************877743...5***************665555..66***********************988777767777 PP EE CS B3 96 vf 97 vf Pd.00g560900.m01 365 VF 366 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKFGDDLSTV ATLSVPDGNV WRVGIKKADN 60 KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY 120 RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK 180 PKNCTNWPDA GNPHPSKGSG LQAGEDIRSM KKTMRKKRKL DPTVQESSSQ HEKEVEIRFR 240 FYESASARKR TVTAEERERA INAAKTFEPV NPFCRVVLRP SYLYRGCIMY LPSCFAEKNL 300 NGVSGFIKLQ SSDGRQWPVR CLYRGGRAKL SQGWYEFTLE NNLGEGDVCV FELLKMKEVV 360 LKVTVFCVVE AAGFVNQPPQ QNASQAKMIR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-138 | B3 family protein |