PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 601aa MW: 65444.5 Da PI: 4.8266

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	85	1.5e-26	28	146	3	128
NAM 3 pGfr.FhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pG++ F+Pt+eelv yL++++egk+ e+ + i+ + +++k eP+dLp fFsk d k+++ +r+nr+t++gy k+tg+ +e++ Pd.00g554490.m01 28 PGVKlFSPTEEELV-GYLTNQIEGKDSEFRDSIPVIdHVCKREPRDLP---------AVFFSKPDYKNSKRDRRNRTTDEGYFKSTGNVREIK 110 566659******.9*********99966*****9.........46****************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++++g k++L f +gr p+++kt+ vmhey+l Pd.00g554490.m01 111 AEqSQAVIGNKRILPFCEGRGPQAKKTKYVMHEYSL 146 98456679************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MVSVSDHSTA AAAASPGCEG VSGKKGLPGV KLFSPTEEEL VGYLTNQIEG KDSEFRDSIP 60 VIDHVCKREP RDLPAVFFSK PDYKNSKRDR RNRTTDEGYF KSTGNVREIK AEQSQAVIGN 120 KRILPFCEGR GPQAKKTKYV MHEYSLTKTG LAKLGVGPNP NQKEEFVLCC LKNKSANSKK 180 LKDVSICSNE LAEPAIGGEI ASNAEDDHAA ATHMIQGPDE HLTDKDVLLG TDNRNECAES 240 ESPNGFSPTD KNDISTCVGS PGSFDVPGGF FLSDFDDLFK EPSCAVIGEN MDSTFLPPEQ 300 LTATSATTPT SATSFGGFGV GSPDGFLLSD IDDLLKEPFC ADQPHQSPHP PLPHQPPPAP 360 QSHQPPSPSQ LQNYCFSTLP SALCTKQGNV PSLYNDDCSR QLSPTGNPPH PHQPPPPSQP 420 QNYCSSTLPS ALCTKQGNVP SLYNDDCSKQ LSPTGNNIST NYHHEPVSNT ACSVQNGATD 480 ERFSEVYKIS TNDHKESVSS EACFQPEENL GILHPFRPQD YTLLSPRNTE LGDVMHANNY 540 IECSGESQSP DNLEFTILFP QFLNNFIGDQ DYYPVKKQHT LLSVTLIYRS HGEESMIAIV 600 E

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MVSVSDHSTA AAAASPGCEG VSGKKGLPGV KLFSPTEEEL VGYLTNQIEG KDSEFRDSIP  60
VIDHVCKREP RDLPAVFFSK PDYKNSKRDR RNRTTDEGYF KSTGNVREIK AEQSQAVIGN  120
KRILPFCEGR GPQAKKTKYV MHEYSLTKTG LAKLGVGPNP NQKEEFVLCC LKNKSANSKK  180
LKDVSICSNE LAEPAIGGEI ASNAEDDHAA ATHMIQGPDE HLTDKDVLLG TDNRNECAES  240
ESPNGFSPTD KNDISTCVGS PGSFDVPGGF FLSDFDDLFK EPSCAVIGEN MDSTFLPPEQ  300
LTATSATTPT SATSFGGFGV GSPDGFLLSD IDDLLKEPFC ADQPHQSPHP PLPHQPPPAP  360
QSHQPPSPSQ LQNYCFSTLP SALCTKQGNV PSLYNDDCSR QLSPTGNPPH PHQPPPPSQP  420
QNYCSSTLPS ALCTKQGNVP SLYNDDCSKQ LSPTGNNIST NYHHEPVSNT ACSVQNGATD  480
ERFSEVYKIS TNDHKESVSS EACFQPEENL GILHPFRPQD YTLLSPRNTE LGDVMHANNY  540
IECSGESQSP DNLEFTILFP QFLNNFIGDQ DYYPVKKQHT LLSVTLIYRS HGEESMIAIV  600
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	2e-23	NAC family protein