PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 416aa MW: 46497.3 Da PI: 5.9973

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.1	4.6e-29	18	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l pG++F+Ptd+el+++yLkkk++g++ e++++i+e+++ ++eP+dLp +fFs+ d +++g+ +r+t+ g+ k+tgk +e+ Pd.00g554460.m01 18 LLPGIKFSPTDKELLSFYLKKKIAGEDSEFSNIIPEINLREHEPRDLP--------TEFFFSEPDYMSSNGDSCHRTTNVGFYKSTGKPREIE 102 579*************************999**********9........359****************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++++g k+ + fy+g+ap+ + t+ v+h+++l Pd.00g554460.m01 103 DElSKAVIGEKRYMPFYEGHAPEHKLTKYVLHQFSL 138 9988899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MGSGGGTTDE RVSVPMGLLP GIKFSPTDKE LLSFYLKKKI AGEDSEFSNI IPEINLREHE 60 PRDLPTEFFF SEPDYMSSNG DSCHRTTNVG FYKSTGKPRE IEDELSKAVI GEKRYMPFYE 120 GHAPEHKLTK YVLHQFSLTK TELAKLAPNR EFVLNHLTIK KGSTKARNPK PNYKKRKYDS 180 NCDKLAEHGI PGYIASNYKD DQAAAAANMI PEPEEHLADE DVLLGSENRN ECAESESANG 240 CRLINNNDSS TLAVGSPGGC FPSVYGNVAA YDPFREVSFQ PEENLISPFL PSSLRDIPLC 300 DSDLLEPLGG VYDSYSGVRR QTTQVKYVLV LSAIAQHSQV LETSNLLSEH ENHRQVLMFE 360 MPSGTLLFSD ETHIPQYQPA SIHVFTHGRC SEKNPTAKLY HRTRLGMLQS IVLLFI

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MGSGGGTTDE RVSVPMGLLP GIKFSPTDKE LLSFYLKKKI AGEDSEFSNI IPEINLREHE  60
PRDLPTEFFF SEPDYMSSNG DSCHRTTNVG FYKSTGKPRE IEDELSKAVI GEKRYMPFYE  120
GHAPEHKLTK YVLHQFSLTK TELAKLAPNR EFVLNHLTIK KGSTKARNPK PNYKKRKYDS  180
NCDKLAEHGI PGYIASNYKD DQAAAAANMI PEPEEHLADE DVLLGSENRN ECAESESANG  240
CRLINNNDSS TLAVGSPGGC FPSVYGNVAA YDPFREVSFQ PEENLISPFL PSSLRDIPLC  300
DSDLLEPLGG VYDSYSGVRR QTTQVKYVLV LSAIAQHSQV LETSNLLSEH ENHRQVLMFE  360
MPSGTLLFSD ETHIPQYQPA SIHVFTHGRC SEKNPTAKLY HRTRLGMLQS IVLLFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	177	PKPNYKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-25	NAC family protein