PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g554450.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 398aa MW: 44389.3 Da PI: 4.322 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.4 | 6.3e-15 | 19 | 92 | 2 | 73 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeek..ewyfFskrdkkyatgkr 73 pGfrF Pt+e lv +yLkkk+egk+ +++++i+e+d++k+eP d p + ++ + + + ++ ++k+a+ k+ Pd.00g554450.m02 19 LPGFRFYPTEEVLVGYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVPVlLLGSS-RldKDFVLCRLKNKSANYKK 92 69***************************999***************5233333.33255777777777665443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MSSISRTTME EGDSVPVVLP GFRFYPTEEV LVGYYLKKKI EGKDSNFSHI IPEIDVCKHE 60 PCDVPVLLLG SSRLDKDFVL CRLKNKSANY KKVKADSGGC IASNSEDDQA AATDMISEPL 120 EHLASQEVGD VLNGNGDHDE CTESPNGTGL IDNNDISSCD DDEIDTWIFY DFDNQAACDL 180 FQEYCAEPGE NMDSLLPPPQ PPLPPLPQDY CSSTQQSSLY TNQGNVPYVY DGDCNRQQSP 240 IGDRNSYLTH KNNMSMNNQI EPVSNITYGV QNRATGESNS EVNNNSTNDF KEPVSNITCN 300 FNNGAPNERI SKACSQPKEN LGSCFDPFQL QDFTLLSPMN LELGDFEHDN KLYWHAMSCH 360 TLPLFMFIHG RCCEKNPTAK LYHKTRLEKL QSIALLSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 9e-13 | NAC family protein |