PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 444aa MW: 50063.3 Da PI: 4.6881

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.4	1.6e-24	39	153	18	128
NAM 18 yLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvgl 102 +Lk+ ++ ++++i+e+d yk+ePwdL + + + w+ Fs+ d ky + r+nr t++g+Wk tg+ +ev+s+ +++l+ Pd.00g554410.m01 39 FLKQLMQ----GMASIIPEIDFYKHEPWDLAgAglmfpDSPYQARTWFCFSRPDYKYVDSPRRNRLTEKGFWKITGQPREVKSRqlSKSLTCK 127 3333333....33468************843676663334788**********************************9777777999 PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kktL+f+ gr +k++ktdWv +ey l Pd.00g554410.m01 128 KKTLTFHLGRPKKSSKTDWVKQEYYL 153 9*********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MVNLLWKKIN GNDCQVMPEI NYKPWDLPDN ESIPLFLRFL KQLMQGMASI IPEIDFYKHE 60 PWDLAGAGLM FPDSPYQART WFCFSRPDYK YVDSPRRNRL TEKGFWKITG QPREVKSRQL 120 SKSLTCKKKT LTFHLGRPKK SSKTDWVKQE YYLTPTDPGS NPNQMSGLVL YRVKYRSADY 180 ESDNNCVLGT GNLNDGEPGG FVSSDFDDMI QEPCDQQEHL DSPSPPPEPP RPHQLPQLGN 240 VHGSTGDYIA SNSDNQAAAI HHMITDEEEL LAYKELERVL LGSGNPDDGE LCTCVSSDML 300 RELCAQLGED LDSPFPPPGP PELGNAPDVY TDECSSWPTP IEDNDSSLPN KNNIPTNYYS 360 KPVSNTASDF ENQTKDERIP EVLLEESECR VVSQHKVRKL QLIVLLFKPF EAGMEWAAGT 420 TLKGSFMFLE ASPSSRKPSS PMVL

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MVNLLWKKIN GNDCQVMPEI NYKPWDLPDN ESIPLFLRFL KQLMQGMASI IPEIDFYKHE  60
PWDLAGAGLM FPDSPYQART WFCFSRPDYK YVDSPRRNRL TEKGFWKITG QPREVKSRQL  120
SKSLTCKKKT LTFHLGRPKK SSKTDWVKQE YYLTPTDPGS NPNQMSGLVL YRVKYRSADY  180
ESDNNCVLGT GNLNDGEPGG FVSSDFDDMI QEPCDQQEHL DSPSPPPEPP RPHQLPQLGN  240
VHGSTGDYIA SNSDNQAAAI HHMITDEEEL LAYKELERVL LGSGNPDDGE LCTCVSSDML  300
RELCAQLGED LDSPFPPPGP PELGNAPDVY TDECSSWPTP IEDNDSSLPN KNNIPTNYYS  360
KPVSNTASDF ENQTKDERIP EVLLEESECR VVSQHKVRKL QLIVLLFKPF EAGMEWAAGT  420
TLKGSFMFLE ASPSSRKPSS PMVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-20	NAC family protein