PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554360.m03

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 666aa MW: 76880.6 Da PI: 4.7927

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554360.m03	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.8	1.4e-16	17	87	51	127
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +k+++++w+fF k +k +ratk+g+Wk t kd+ ++++ +++++ k++L+fy gr +k++kt+Wv+hey Pd.00g554360.m03 17 IKSDDENWFFFYKYKK-------GSRATKEGFWKITSKDRVIKARdNRTVIAKKRILTFYIGRVRKSTKTNWVIHEYY 87 5678899999987644.......579999************995566688899********************7 PP
2	NAM	28.6	4.2e-09	396	437	12	54
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ Pd.00g554360.m03 396 EELVDHYLKNKRQARDFHV-DHIPEIDICKYDPWEIPGLFTEQ 437 9****************.89************9543332 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MARLSRAAEE EEDKSLIKSD DENWFFFYKY KKGSRATKEG FWKITSKDRV IKARDNRTVI 60 AKKRILTFYI GRVRKSTKTN WVIHEYYIPD DAHPNANKQR DFVLCHLKKN VKKPDENTDV 120 ATTCDEGETS THNASDFENQ PVHGMVSLEE DTRPRENLDY FERTRDLWLA NSFSNNDHDA 180 FQSDFEANDP EAEAFVRSVL NDPQCDTDTE PIHVSLQGRR FTSSPSTRDT EVILHNQLSR 240 PAASPVHVAP QPQTSELQLQ SGTSERTHRP QPKSINVLRR TSAVNVDAFN VSINCIRLAT 300 DDEYYTKERA RRRTYPPVGK LREIKLQQSK AKEPEERRTS VDFPQKQISI TKSSIDRKDG 360 WNIADSKLVL EMQKTDHRWI KIQDENQPIP MESGKEELVD HYLKNKRQAR DFHVDHIPEI 420 DICKYDPWEI PGLFTEQDSP YHASPDPQLA ERDFVLYRMK KNPDKKDTSV FAEGEPSSYN 480 WSNCEDQAAD DVTPESQDHS PSTLQSPAYI ELGDVLQVND FNEDCTDMQS PFGDYDYSVT 540 HKNDFSTCDE VAYDMSQEAQ YYHSFTLPSP IYSELGSVPH DDVYNNEWQS AYANFENQTT 600 DERISEECPQ PKENLRSILS ASQLADYTSQ SLMNIEEYQM RPCEIGIEGA AGTNWEGSFF 660 NFPLKP

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MARLSRAAEE EEDKSLIKSD DENWFFFYKY KKGSRATKEG FWKITSKDRV IKARDNRTVI  60
AKKRILTFYI GRVRKSTKTN WVIHEYYIPD DAHPNANKQR DFVLCHLKKN VKKPDENTDV  120
ATTCDEGETS THNASDFENQ PVHGMVSLEE DTRPRENLDY FERTRDLWLA NSFSNNDHDA  180
FQSDFEANDP EAEAFVRSVL NDPQCDTDTE PIHVSLQGRR FTSSPSTRDT EVILHNQLSR  240
PAASPVHVAP QPQTSELQLQ SGTSERTHRP QPKSINVLRR TSAVNVDAFN VSINCIRLAT  300
DDEYYTKERA RRRTYPPVGK LREIKLQQSK AKEPEERRTS VDFPQKQISI TKSSIDRKDG  360
WNIADSKLVL EMQKTDHRWI KIQDENQPIP MESGKEELVD HYLKNKRQAR DFHVDHIPEI  420
DICKYDPWEI PGLFTEQDSP YHASPDPQLA ERDFVLYRMK KNPDKKDTSV FAEGEPSSYN  480
WSNCEDQAAD DVTPESQDHS PSTLQSPAYI ELGDVLQVND FNEDCTDMQS PFGDYDYSVT  540
HKNDFSTCDE VAYDMSQEAQ YYHSFTLPSP IYSELGSVPH DDVYNNEWQS AYANFENQTT  600
DERISEECPQ PKENLRSILS ASQLADYTSQ SLMNIEEYQM RPCEIGIEGA AGTNWEGSFF  660
NFPLKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	8e-19	NAC family protein