PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g551130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 707aa MW: 79579.8 Da PI: 5.7329

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g551130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.7	9e-14	106	180	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+++vGFs+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l+++++ + w+ tk++++HnH+++ Pd.00g551130.m01 106 LYDAYSRHVGFSTHVGQFSRTKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEDHNHSMV 180 69************************************999877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MVSGFSADGN YAVVIVLGKE EIEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM 60 EENTEPGEKQ NVNQNFAGRE MSIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVGFSTHV 120 GQFSRTKPDG PIVTWDFACS REVFKRKNVE SCNAMLRIER KGANSWVATK FVEDHNHSMV 180 SPSKVHYLRP RRHFAGATKN AAETLDATTD VYFATEGNVS YEPNRGGQER LAHTYLAHPS 240 LYGELYSCIN FSETIEDFES SWASLLERYD LLRNDWLQAV YNARKQWAPV YFRGTFFAAI 300 FSNQGISSFF DGYVNQQTSI PLFFKQYERA LELSLEKEIE ADYDTMCTTP VLKTPSPMEQ 360 QAANLYTKKV FAKFQEELVE TFVYTANKIE GDGLVSKYRV AKYEHDDKAY IVTLNVSEMK 420 ASCSCQMFEY SGILCRHILT VFTVTNVLTL PPHYILKRWT RNAKSGVGLD ELSSENQGIE 480 TLNMRFNNLC REAIKYAEEG AIAVETYNAA MSALQEGGKK ISVVKKNVAK VTPPSSQPSG 540 NIQEDNMKKS PLPLGEMAPS LWPWQEALPH RFNLNDGGVP VADLNQPSMA PVSIHPDGAH 600 PDNTVVLTCF KSMAWIIENK NSTSAGKVAV INLKLQDYGK NPAGETEVQF RLTRVTLEPM 660 LRSMAYISQQ LSAPANRVAV INLKLQDTKT TSGETEVNYD KSSFILI

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MVSGFSADGN YAVVIVLGKE EIEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM  60
EENTEPGEKQ NVNQNFAGRE MSIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVGFSTHV  120
GQFSRTKPDG PIVTWDFACS REVFKRKNVE SCNAMLRIER KGANSWVATK FVEDHNHSMV  180
SPSKVHYLRP RRHFAGATKN AAETLDATTD VYFATEGNVS YEPNRGGQER LAHTYLAHPS  240
LYGELYSCIN FSETIEDFES SWASLLERYD LLRNDWLQAV YNARKQWAPV YFRGTFFAAI  300
FSNQGISSFF DGYVNQQTSI PLFFKQYERA LELSLEKEIE ADYDTMCTTP VLKTPSPMEQ  360
QAANLYTKKV FAKFQEELVE TFVYTANKIE GDGLVSKYRV AKYEHDDKAY IVTLNVSEMK  420
ASCSCQMFEY SGILCRHILT VFTVTNVLTL PPHYILKRWT RNAKSGVGLD ELSSENQGIE  480
TLNMRFNNLC REAIKYAEEG AIAVETYNAA MSALQEGGKK ISVVKKNVAK VTPPSSQPSG  540
NIQEDNMKKS PLPLGEMAPS LWPWQEALPH RFNLNDGGVP VADLNQPSMA PVSIHPDGAH  600
PDNTVVLTCF KSMAWIIENK NSTSAGKVAV INLKLQDYGK NPAGETEVQF RLTRVTLEPM  660
LRSMAYISQQ LSAPANRVAV INLKLQDTKT TSGETEVNYD KSSFILI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein