PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g550650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 707aa MW: 79563.7 Da PI: 5.718

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g550650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.7	9e-14	106	180	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+++vGFs+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l+++++ + w+ tk++++HnH+++ Pd.00g550650.m01 106 LYDAYSRHVGFSTHVGQFSRTKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEDHNHSMV 180 69************************************999877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MVSGFSADGN YAVVIVLGKE ETEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM 60 EENTEPGEKQ NVNQNFAGRE ISIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVGFSTHV 120 GQFSRTKPDG PIVTWDFACS REVFKRKNVE SCNAMLRIER KGANSWVATK FVEDHNHSMV 180 SPSKVHYLRP RRHFAGATKN AAETLDATTD VYFATEGNVS YEPNHGGQER LAHTYLAHPS 240 LYGELYSCIN FSETIEDFES SWASLLERYD LLRNDWLQAV YNARKQWAPV YFRGTFFAAI 300 FSNQGVSSFF DGYVNQQTSI PLFFKQYERA LELSLEKEIE ADYDTMCTTP VLKTPSPMEQ 360 QAANLYTKKV FAKFQEELVE TFVYTANKIE GDGLVSKYRV AKYEHDDKAY VVTLNVSEMK 420 ASCSCQMFEY SGILCRHILT VFTVTNVLTL PPHYILKRWT RNAKSGVGLD EQSSENQGIE 480 TLNMRFNNLC REAIKYAEEG AIAVETYNAA MSALQEGGKK ISVVKKNVAK VTPPSSQPSG 540 NIQEDNMKKS PLPLGEMAPS LWPWQEALPH RFNLNDGGVP VADLNQPSMA PVSIHPDSAH 600 PDNTVVLTCF KSMAWIIENK NSTSAGKVAV INLKLQDYGK NPAGETEVQF RLTRVTLEPM 660 LRSMAYISQQ LSALANRVAV INLKLQDTKT TSGETEVNYD KSSFILI

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MVSGFSADGN YAVVIVLGKE ETEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM  60
EENTEPGEKQ NVNQNFAGRE ISIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVGFSTHV  120
GQFSRTKPDG PIVTWDFACS REVFKRKNVE SCNAMLRIER KGANSWVATK FVEDHNHSMV  180
SPSKVHYLRP RRHFAGATKN AAETLDATTD VYFATEGNVS YEPNHGGQER LAHTYLAHPS  240
LYGELYSCIN FSETIEDFES SWASLLERYD LLRNDWLQAV YNARKQWAPV YFRGTFFAAI  300
FSNQGVSSFF DGYVNQQTSI PLFFKQYERA LELSLEKEIE ADYDTMCTTP VLKTPSPMEQ  360
QAANLYTKKV FAKFQEELVE TFVYTANKIE GDGLVSKYRV AKYEHDDKAY VVTLNVSEMK  420
ASCSCQMFEY SGILCRHILT VFTVTNVLTL PPHYILKRWT RNAKSGVGLD EQSSENQGIE  480
TLNMRFNNLC REAIKYAEEG AIAVETYNAA MSALQEGGKK ISVVKKNVAK VTPPSSQPSG  540
NIQEDNMKKS PLPLGEMAPS LWPWQEALPH RFNLNDGGVP VADLNQPSMA PVSIHPDSAH  600
PDNTVVLTCF KSMAWIIENK NSTSAGKVAV INLKLQDYGK NPAGETEVQF RLTRVTLEPM  660
LRSMAYISQQ LSALANRVAV INLKLQDTKT TSGETEVNYD KSSFILI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein