PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g548320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SRS
Protein Properties Length: 308aa    MW: 33374.9 Da    PI: 8.8021
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g548320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70254.15.9e-1716623284149
            DUF702  84 salsstklssaeskkele.tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLyd 149
                       s +++ +++  +++ + + ++slP++v+++avfrc rv+++++g +elaYq++v+i+Gh ++ + y 
  Pd.00g548320.m01 166 SVAKRPRVVVPSQNANANiKQSLPDKVRAPAVFRCHRVTAISNGAAELAYQATVKISGHEWRLYFYS 232
                       3333334443333333330345*************************************99877775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLGLRDILLI APTPSMHQQN QPISSDLPLP SSTTLGVGLG IFPLLTATPC APHAPTTAEV  60
NSDSSHFWGL RRCQELNPSR QDMLNFGNHG AQNEQVVECE GHNNNNENEG GGGGESSKMK  120
ACKDCGNKAK KGCEYGRKES LIRGTISERM QKSSISLTAG SSGSSSVAKR PRVVVPSQNA  180
NANIKQSLPD KVRAPAVFRC HRVTAISNGA AELAYQATVK ISGHEWRLYF YSTSSSSNCL  240
SDFNQLRIAD RNHLCYSLML EAPPATSFVL LRFSINIEGT YGSDLLKTPG SPFFFPAVRT  300
LRVLIAFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54430.12e-12SRS family protein