PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g547640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 288aa MW: 33097 Da PI: 10.3373 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.2 | 3.5e-14 | 10 | 97 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkvl + s++l +p +f+ +++g+ +++ +l++ s +W v++ +k ++++++kGWk+Fv++++Lk +f+vF + g+ +f +v Pd.00g547640.m01 10 FFKVL--VGDF-SNQLQIPPPFLVHFNGNVPQQ--SRLRT-SAGTWAVNV--QKVNDKFFFQKGWKKFVHDHDLKLCEFLVFGYAGNLGF--YVD 94 56666..3444.456*******98885554453..56666.7789*****..999999**************************998888..777 PP EE- CS B3 96 vfr 98 ++ Pd.00g547640.m01 95 IYG 97 765 PP | |||||||
2 | B3 | 62.1 | 9.4e-20 | 182 | 264 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 ffk+ +++++ ++g ++lp++f+++h +e++ t+tl+ ++g++W vkl +++ +g+ l+ G F+++n+L++gD++vF l+++ Pd.00g547640.m01 182 FFKIAIQNSYIRRGYMYLPRNFVRTHL--TEQQATVTLRVSDGKTWPVKLAFEGERGK--LGCGFMTFCRDNKLEVGDMCVFVLINK 264 99************************5..346779***************99888888..**********************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MVMARRKPSF FKVLVGDFSN QLQIPPPFLV HFNGNVPQQS RLRTSAGTWA VNVQKVNDKF 60 FFQKGWKKFV HDHDLKLCEF LVFGYAGNLG FYVDIYGRDG CKKKFVTAIR ERGRRPHEEG 120 HGNVIHRRSP RHHGKQNLPS IDPIKYEATD TESETSMHPL ATSTGKTIPL QRNNSFNSEK 180 PFFKIAIQNS YIRRGYMYLP RNFVRTHLTE QQATVTLRVS DGKTWPVKLA FEGERGKLGC 240 GFMTFCRDNK LEVGDMCVFV LINKIEFLFE AVFYRKTEAS SCTSSPGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18090.1 | 1e-19 | B3 family protein |