PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g547630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 1323aa    MW: 151004 Da    PI: 7.4975
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g547630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.11.1e-117831799
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      ++p+kf+ ++g +   s  + l+ +sg +W+++l  r+  g+ ++ kGW eF +   L+   ++vF+++g+s+f  +v +f++
  Pd.00g547630.m01  7 RIPNKFLMKCGDD--LSNPVFLNVPSGSKWKMEL--RRWHGEAWFDKGWPEFFEFYSLDNCHSLVFRYEGNSKF--NVCIFDQ 83
                      69********988..6667***************..88888899**************************9999..9999987 PP
2B349.67e-162102831489
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                         ++lp kf++eh ++ +     +l+ +  r W vkl +++++ r+ +++GW+ F ++n+L+ gD++vF+l+++ + 
  Pd.00g547630.m01 210 YFMSLPAKFVKEHFNQVHD--NAILRVLGERAWPVKLGHWGRG-RIRFQSGWRTFLRDNHLEIGDVCVFELTSNiKP 283
                       569**********655444..69999***********888885.899***********************9876443 PP
3B353.25.5e-17411493488
                       E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                       v +++++  ++ l+lp k  +eh +   ++  ++l  ++gr+W vkl  +  +gr+++ +GW  Fv++n+L++gD++vF+l+++ +
  Pd.00g547630.m01 411 VVMHHSYIHRSYLRLPAKISKEHINW--THDNIVLHVPNGRTWPVKL-GQDARGRVIFLSGWTTFVRDNNLEVGDVCVFELINNvK 493
                       667888888899***********433..3347***************.455566677888********************998633 PP
4B333.66.9e-11821891174
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangL 74 
                       ffk+ +++ +  ++ + l+ +f++eh ++  +s+  +l+ ++gr+W+vkl  ++++++ + +++GW +Fv++n L
  Pd.00g547630.m01 821 FFKIAMHATYIHEHHMNLSSSFVKEHLNQ--TSTYAILRVSDGRTWSVKL--DQYGDArTRFQGGWMDFVRENSL 891
                       899999999999999***********656..567899*************..887777799************98 PP
5B346.85.4e-1588896913100
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                       ++ l++pkkf++++g +   s  + l+ ++g +W+v+l  r+  g+ ++ kGW eF +   L+   ++vF+++g+sef  ++ +f+ks
  Pd.00g547630.m01 888 ENSLSIPKKFLRKYGDD--LSNPVLLNLPNGSKWNVEL--RRWEGEAWFNKGWPEFSEFYSLEHSHSLVFRYEGNSEF--HICIFDKS 969
                       567***********988..666799999**********..88888899**************************9999..****9985 PP
6B3391.4e-12110711871699
                        EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                        ++l  +f   +g+ +++s  +tl d+ gr W v++    k++   +++GW eFv+ n+L++gD+++F l+++++  + v +fr+
  Pd.00g547630.m01 1107 MWLTSDFSILMGHLSKNSANVTLWDLGGRAWVVEF--IAKPR-AKFQSGWLEFVRGNNLNVGDVCIFVLIDNTRLVFEVVIFRA 1187
                        66666665555555557789***************..55554.469************************99999888888875 PP
7B347.14.4e-15124413211698
                        EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
                B3   16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98  
                          lp +f++eh ++   + +++l+ ++ rsW v+l  +k+++++ l+  W +Fv++n+Lk gD++vF+l+++ +   ++v +fr
  Pd.00g547630.m01 1244 KALPAEFVKEHLNQA--HDKVILRVSDERSWHVNL--CKYGRAFRLQ-RWMQFVRENDLKLGDVCVFELINNiKPL-FNVALFR 1321
                        579********6553..348***************..**********.9********************9986655.6777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1323 aa     Download sequence    
MFCVVQRIPN KFLMKCGDDL SNPVFLNVPS GSKWKMELRR WHGEAWFDKG WPEFFEFYSL  60
DNCHSLVFRY EGNSKFNVCI FDQSFKQIDY ALKMPKMKET NSDDSGDVTE ILDESLPRPR  120
KSREKSPLQC LRPHKKARTS SRGKVDFPAK RHGGGKSITA RFSKRTEPIL GRLHPSTTSW  180
KAIALQRAKA FKSDDPFFMV SMGRTNIDGY FMSLPAKFVK EHFNQVHDNA ILRVLGERAW  240
PVKLGHWGRG RIRFQSGWRT FLRDNHLEIG DVCVFELTSN IKPLFDVVFF RATKAPNCTL  300
SPDVDGEQTV PKMEETYEDD GFIETVDDYP SCPKTRKKSP IEPQPHKKNR TCSISKAESK  360
IKDVCGASRT RNFLVRGTEV PRRIDPVAAT GKDIALQRAK AFKSEYPFCW VVMHHSYIHR  420
SYLRLPAKIS KEHINWTHDN IVLHVPNGRT WPVKLGQDAR GRVIFLSGWT TFVRDNNLEV  480
GDVCVFELIN NVKPLFDVVL FSATKAANCI LSPADDDSGC DSGDDSTDDS GDESDDNSIE  540
ILDDFPPVPR KTREKPPHIS LERGVERANS FASKSPFFKI AMHATYIHEH HMNLSSSFVK  600
EHLNQTSTYA ILRVSDGRTW SVKLDQYGDA RTRFQADDDS GCDSGDDSTD DSGDESDDNS  660
IEILDDFPPV PRKTREKPPH ISLERGVERA NSFASKSPFF KIAMHATYIH EHHMNLSSSF  720
VKEHLNQTST YAILRVSDGR TWSVKLDQYG DARTRFQADD DSGCDSGDDS TDDSGDESDD  780
NSIEILDDFP PVPRKTREKP PHISLERGVE RANSFASKSP FFKIAMHATY IHEHHMNLSS  840
SFVKEHLNQT STYAILRVSD GRTWSVKLDQ YGDARTRFQG GWMDFVRENS LSIPKKFLRK  900
YGDDLSNPVL LNLPNGSKWN VELRRWEGEA WFNKGWPEFS EFYSLEHSHS LVFRYEGNSE  960
FHICIFDKSF VEIEYPLTMP EMKETDADDD SSDESDDHSD DASLEILDKF PPCPGKSKEK  1020
SSLPCPRPHK KKRTSSSGNV DFPAKRHDRG TSSTPRFLKR TQVVRGRMHP LTTSGKALAL  1080
QRAKAYKSDK PSFIVPMHRS YIGRHPMWLT SDFSILMGHL SKNSANVTLW DLGGRAWVVE  1140
FIAKPRAKFQ SGWLEFVRGN NLNVGDVCIF VLIDNTRLVF EVVIFRAVEA ANCTLSPDVD  1200
GEETDEDDDS VDSLDDFPPC PKTRKISPIA PQPHKKNRTC STSKALPAEF VKEHLNQAHD  1260
KVILRVSDER SWHVNLCKYG RAFRLQRWMQ FVRENDLKLG DVCVFELINN IKPLFNVALF  1320
RTK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119125PRKSREK
2549555PRKSREK
3671677PRKSREK
4793799PRKSREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-33B3 family protein