PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g547610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 292aa MW: 33363.9 Da PI: 9.542

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g547610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52	1.3e-16	208	292	12	99
HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++l +p +fa+++ +g ++t+tl+ + rsW v+li + k + l++GW F+ +n L+ gD+++F+l++r++ l+v++fr+ Pd.00g547610.m01 208 TYQLLHVPVRFARSFiKGR---KQTVTLQ-FRERSWPVNLIGWTKESPAKLSGGWTAFATENCLRGGDVCTFELIERNNIVLKVHIFRH 292 447889*****996433...3456644.477***99999999***********************999999***996 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MKFVMKYGEH LSSPVHLKLP NGAEWDIELR RGNNGGVWFD KGWPEFSKFC SLDYANWLVF 60 GYEGNSNFHV LIFDRTSTEV EYAMTKPEME ETDYEEEDDN SVEILDGFPP CPRKAREKSP 120 LPCPQPHKKM RTCGKAEGNI NFRPTKTQTS LRNKASDCSR SEMKSRYKGL KTDGQITQRP 180 LNSSSRALGA ANRFIPKNPS FTATVGSTYQ LLHVPVRFAR SFIKGRKQTV TLQFRERSWP 240 VNLIGWTKES PAKLSGGWTA FATENCLRGG DVCTFELIER NNIVLKVHIF RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-33	B3 family protein