PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g547600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 323aa    MW: 36727.6 Da    PI: 7.4263
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g547600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.84.7e-19229323299
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       f+v +++++   g l++p +fa+++ +   +++t+tl+  + rsW v+li r + ++  l++GW+ F+ +n L+egD+++F+l++r++  l+v
  Pd.00g547600.m01 229 FTVVMHPSYIPYGPLTVPIRFARSFVKR--RKQTVTLQV-RERSWPVNLIGRTNESSAKLSGGWSAFATENCLREGDVCTFELIERNDIVLKV 318
                       56778888899999*********99644..555777655.88*******99999999****************************99999*** PP

                       EEE-S CS
                B3  95 kvfrk 99 
                       ++fr+
  Pd.00g547600.m01 319 HIFRH 323
                       **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MKFVMKYGEH LSSPVHLKLP NGAEWDIELR RGNNGGVWFD KGWPEFSKFC SLDYANWLVF  60
GYEGNSNFHV LIFDRTSTEV EYAITKPEME ETDYEEENDN SVEILDGFPP CPRKTREKSP  120
LPCPQPHKKM RTCGKAEGNI NFRPTKTQTS LRNKASDCSR SEMKKEDESD DDSVETLDTF  180
PSCLKTGDKS PLAPSEVKDR VGRMHASTTC GKAIALQRAI AFESVSPCFT VVMHPSYIPY  240
GPLTVPIRFA RSFVKRRKQT VTLQVRERSW PVNLIGRTNE SSAKLSGGWS AFATENCLRE  300
GDVCTFELIE RNDIVLKVHI FRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118PRKTREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-18B3 family protein