PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g546110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 296aa MW: 34185.1 Da PI: 4.3727 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.5 | 1.1e-22 | 6 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 +p+G+rF P +eel+ +yL ++v+g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+W Pd.00g546110.m01 6 VPVGYRFTPLEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTqEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 95 599************************999.99*******9879****7423322..24355688******************643344999* PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k + k++ + g+++g++k + + + +p+ +W+m e++l Pd.00g546110.m01 96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137 **********9.999***********655555..89*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MGGYQVPVGY RFTPLEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTQEPW EIWRDFHHSS 60 PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM 120 NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SGKSKLEERQ TDHEVDMPSR 180 VEIQAQHVHD DQQQYIDPST YDQLRFLDDY LMNDVEGEQN TMVNPSLLAQ YDQQDMIGTS 240 TEDQLKVLED FLMNDVEGEQ DTMVNPALLA QYGQQGTSIE DQLRLFEDYL MSDIEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61910.1 | 9e-15 | NAC family protein |