PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g545930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 217aa MW: 25141.9 Da PI: 5.0405

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g545930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.6	1e-18	7	118	1	106
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 +p+G++F+P++eel +yL ++++g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+W Pd.00g545930.m01 7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 96 599**********************999.99***98797423322..24355688***************643344999 PP NAM 84 katgkdkevlskkgelvglkktL 106 k + k++ + g+++g++k + Pd.00g545930.m01 97 KGEDSGKKIRA-CGNDIGIRKRF 118 *******99.9999**986 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPKGVVP DCDLYGTKEP WEIWRDFHHS 60 SPDDQEDIYV FTTLKKKTPN GSRFCRTVGA AGTGVWKGED SGKKIRACGN DIGIRKRFRK 120 KETPGKRKFE ELQNHEDVPP RGEIQAQHVH DDQQHHIGPS TYDQLRVLDF MNDVEGENDM 180 VNPTLLAQYD QQEHLGTSTD DQLIRFLEDY LVDVEQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	128	RKRFRKKETPGKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-14	NAC family protein