PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g545910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 330aa    MW: 37941.4 Da    PI: 4.4195
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g545910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.81e-2361371128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 
                       +p+G+rF P++eel+ +yL +kv+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+W
  Pd.00g545910.m01   6 VPVGYRFTPSEEELLLHYLLPKVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 95 
                       599************************999.99*******9879****7423322..24355688******************643344999* PP

               NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k   + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Pd.00g545910.m01  96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                       **********9.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAGYQVPVGY RFTPSEEELL LHYLLPKVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVQVPNKETI VLCLVRKKET SGKSKLEERQ NHEVDMASRE  180
EIQAQHVHDD QQQHIDASTY DQLRFLDDYL MNDVGGEQNT MVNPSLLAQY DQQDMIGSST  240
EDQLRVLEDF LMNDVEGEQD TMVNPTLLAQ YDQQDMIGTS TEDQLRVLEE FLMNDVEGEE  300
DPWLIQLCLH STVSRAQVLK INLSFSRITL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.15e-21NAC family protein