PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g525880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 358aa    MW: 39509.8 Da    PI: 6.9633
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g525880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof101.55.2e-3261121262
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       ++k l+cprC+s +tkfC +nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+ss
  Pd.00g525880.m01  61 PDKVLPCPRCNSLKTKFCCFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSS 121
                       78999****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEDPSVKVSC KQDQFFELDK GSENNHHGQI LENEGEVDCN PEEDYIASDT DDGKEKSFTK  60
PDKVLPCPRC NSLKTKFCCF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS  120
SSQYQVVGEP SAVPVTQGDT LNFVGQQHLL PVQLPASPKP VNGMREVLNS GIDTVLVESI  180
ATALNHKNQK RSSKDSSAAV GDNSEEPSSS SSSLTATTSQ QNACLGKEME QVDLPRYGND  240
YNLTYTEQYF PVPQWAENSS WGMMMFGPHS NNPNPSHMGS LPMVTVPGFC IPSFIFPIAP  300
SSYQGYMPSS DAKKWNAQLV GSDGSLSPSS SNGNSRCSGN SSPRSGKYSR DAKMYRQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.12e-33Dof family protein