PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g524090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 422aa MW: 46684.5 Da PI: 8.0298

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g524090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.2e-15	101	160	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g524090.m01 101 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 160 789****************655454478446***********************98 PP
2	AP2	48.7	1.9e-15	203	254	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g524090.m01 203 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 254 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MTIMPLRSDG SLCVPPADPF RRPNGSEDWR YENHMGVTDP NDEGGPKLED FLGSCYSSSP 60 PPSETKVYNC QMESKKRPVG KSAAREPVPR KSIDTFGQRT SQFRGVTRHR WTGRYEAHLW 120 DNSCRKEGQT RKGRQVYLGG YDKEEKAARA YDLAALKYWG STTHINFPLS TYEKELEEMK 180 NMTRQEFVAN LRRKSSGFSR GASVYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE 240 AAEAYDIAAI KFRGTSAVTN FDMSRYDVKR ICSSSTLIAS ELAKRSPTPA AIEDFNSCGS 300 STSAQPLLAI ASGEPCDDMA EMVWNNNNAE DHSHSHHENS NTTNSNAALG ASSSRNSSSP 360 QSPKCSFGHT SEFGLGGGDY SHAYFSLQGA KYEDGNGGGN DHSRLGNLGL VPQVPMFALW 420 ND

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MTIMPLRSDG SLCVPPADPF RRPNGSEDWR YENHMGVTDP NDEGGPKLED FLGSCYSSSP  60
PPSETKVYNC QMESKKRPVG KSAAREPVPR KSIDTFGQRT SQFRGVTRHR WTGRYEAHLW  120
DNSCRKEGQT RKGRQVYLGG YDKEEKAARA YDLAALKYWG STTHINFPLS TYEKELEEMK  180
NMTRQEFVAN LRRKSSGFSR GASVYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE  240
AAEAYDIAAI KFRGTSAVTN FDMSRYDVKR ICSSSTLIAS ELAKRSPTPA AIEDFNSCGS  300
STSAQPLLAI ASGEPCDDMA EMVWNNNNAE DHSHSHHENS NTTNSNAALG ASSSRNSSSP  360
QSPKCSFGHT SEFGLGGGDY SHAYFSLQGA KYEDGNGGGN DHSRLGNLGL VPQVPMFALW  420
ND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-129	AP2 family protein