PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g521720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SRS | ||||||||
Protein Properties | Length: 114aa MW: 11817.7 Da PI: 5.7325 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 49.7 | 1.3e-15 | 1 | 32 | 123 | 154 |
DUF702 123 vddgeeelaYqtavsigGhvfkGiLydqGlee 154 +dd+++++aYqtav+igGhvfkG+LydqG++ Pd.00g521720.m01 1 MDDADDQYAYQTAVNIGGHVFKGLLYDQGPDG 32 79***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MDDADDQYAY QTAVNIGGHV FKGLLYDQGP DGQYYPSSST GGGGESSSGG RHDHQEGGGA 60 HPHHQQHNLV TVAATAGTTS HGGNPSTTLL DPSLFPTPLN AFMAGTQIFP PPRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 2e-15 | SRS family protein |